Detailed information NTG0089087

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: OCU74_RS14645
• Genome accession: NZ_AP024883
• Coordinates: 3285178..3286329 (-)
• Length: 383 a.a.
• NCBI ID: WP_087482258.1
• Uniprot ID: -
• Organism: Vibrio mangrovi strain CECT 7927
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3280178..3291329

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU74_RS14625	-	3280827..3281663 (-)	837	WP_087482262.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	-
OCU74_RS14630	-	3281744..3283315 (-)	1572	WP_087482261.1	AAA family ATPase	-
OCU74_RS14635	aroB	3283353..3284441 (-)	1089	WP_087482260.1	3-dehydroquinate synthase	-
OCU74_RS14640	aroK	3284472..3284990 (-)	519	WP_087482259.1	shikimate kinase AroK	-
OCU74_RS14645	pilQ	3285178..3286329 (-)	1152	WP_087482258.1	type IV pilus secretin PilQ	Machinery gene
OCU74_RS14650	-	3286310..3286912 (-)	603	WP_087482257.1	hypothetical protein	-
OCU74_RS14655	-	3286902..3287492 (-)	591	WP_087482256.1	PilN domain-containing protein	-
OCU74_RS14660	pilM	3287482..3288393 (-)	912	WP_087482255.1	pilus assembly protein PilM	-

Sequence

Protein

• Length: 383 a.a.
• Molecular weight: 41905.86 Da
• Isoelectric Point: 4.9316

>NTDB_id=89087 OCU74_RS14645 WP_087482258.1 3285178..3286329(-) (pilQ) [Vibrio mangrovi strain CECT 7927]
MIMSRNKYRRILSDFRFWGLLFLWGLNCVVCVAQPVSDPFDVPQPEQTEALSAHEHKESESSLATVLIPVQYAKTSELLP
LLEGGKQPGLLSELGTVRVDPRTNSLIIRDIPSRLASVRDMIQALDIPVRQVRIEARIVIVSEGALDELGVRWGAEMRQG
SFAVGGNIEQMHAGGHDTGVTESAEVTDFLNVNLPSTSGNASSIAFQLAKLGAGTLLDLELSALQSESRAEIISSPSLLT
TNHQAAFIEQGTEIPYQESSSDDETTIAFKKAVLSLEVTPNITPDHHMLLDLKVTQDRPGEVVKTGSGEAVAITTQRIGT
QVLVNDGETVVLGGIYQKIQMHRIDKVPVLGDLPLLGNLFRRNYQKTDKNELLIFVTPRVVIQ

Nucleotide

• Length: 1152 bp

>NTDB_id=89087 OCU74_RS14645 WP_087482258.1 3285178..3286329(-) (pilQ) [Vibrio mangrovi strain CECT 7927]
ATGATCATGAGTCGAAATAAGTACCGGAGAATATTATCTGATTTTCGGTTTTGGGGATTGTTGTTCTTATGGGGACTGAA
CTGTGTGGTATGTGTGGCTCAACCGGTTAGTGACCCATTTGATGTACCGCAGCCGGAGCAGACAGAAGCTCTCTCTGCGC
ATGAACACAAAGAGTCAGAGTCATCTTTAGCAACAGTACTGATTCCCGTTCAGTATGCAAAAACGTCTGAACTGCTTCCG
TTGCTTGAGGGGGGAAAACAACCTGGACTGTTATCTGAATTAGGGACTGTACGGGTTGATCCGCGCACCAATTCACTGAT
TATACGGGATATACCATCCCGTCTGGCGTCTGTCCGGGACATGATTCAGGCATTGGATATTCCGGTCCGGCAGGTCAGAA
TTGAGGCGAGAATTGTGATTGTCAGCGAAGGCGCACTGGATGAACTTGGTGTTCGCTGGGGGGCGGAAATGAGGCAGGGG
AGTTTTGCTGTCGGGGGGAATATTGAGCAGATGCATGCGGGTGGTCATGACACCGGAGTGACGGAATCGGCAGAGGTGAC
CGATTTTCTGAATGTTAATTTGCCGAGTACTTCCGGTAATGCTTCATCTATTGCTTTCCAACTGGCAAAGCTGGGAGCCG
GGACTCTGCTGGATTTGGAACTGTCTGCTTTACAAAGTGAATCCAGAGCCGAAATTATTTCCAGTCCGAGTTTGTTAACC
ACAAATCATCAGGCGGCATTTATCGAACAGGGGACAGAAATTCCCTATCAGGAATCGAGTTCTGATGATGAGACGACAAT
TGCTTTCAAGAAAGCAGTACTGAGTCTGGAAGTGACACCGAATATTACTCCGGATCACCACATGCTCCTTGATTTAAAAG
TGACACAGGATCGTCCCGGAGAGGTTGTCAAAACAGGTTCGGGAGAAGCTGTCGCGATTACCACTCAAAGAATCGGGACT
CAGGTGTTGGTGAATGACGGAGAAACTGTAGTACTGGGCGGAATTTATCAGAAAATACAGATGCACCGGATTGATAAAGT
TCCCGTGCTGGGGGATTTGCCATTATTAGGCAACTTGTTTCGGCGTAATTATCAAAAAACAGATAAGAACGAACTGCTTA
TTTTCGTCACGCCTCGGGTTGTTATTCAATAA

Domains

Predicted by InterproScan.

• Bacterial type II/III secretion system short domain (Secretin_N) (66-131)

• Bacterial type II and III secretion system protein (Secretin) (223-381)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Vibrio cholerae strain A1552	60.767	88.512	0.538
pilQ	Vibrio cholerae O1 biovar El Tor strain E7946	60.767	88.512	0.538
pilQ	Vibrio campbellii strain DS40M4	58.074	92.167	0.535
pilQ	Legionella pneumophila strain ERS1305867	45.133	88.512	0.399
pilQ	Legionella pneumophila strain Lp02	45.133	88.512	0.399
comQ	Acinetobacter baylyi ADP1	40.162	96.867	0.389
comE	Haemophilus influenzae Rd KW20	44.136	84.595	0.373
comE	Haemophilus influenzae 86-028NP	44.136	84.595	0.373
comE	Glaesserella parasuis strain SC1401	41.888	88.512	0.371