Detailed information NTG0889405

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: RW078_RS01680
• Genome accession: NZ_CP136178
• Coordinates: 355867..356925 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain ABO21-A045
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 350867..361925

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RW078_RS01665 (RW078_01665)	-	351973..352305 (+)	333	WP_000169598.1	hypothetical protein	-
RW078_RS01670 (RW078_01670)	-	352308..353132 (+)	825	WP_317858991.1	putative RNA methyltransferase	-
RW078_RS01675 (RW078_01675)	ponA	353150..355705 (-)	2556	WP_125564855.1	penicillin-binding protein PBP1a	-
RW078_RS01680 (RW078_01680)	pilM	355867..356925 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
RW078_RS01685 (RW078_01685)	pilN	356925..357566 (+)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
RW078_RS01690 (RW078_01690)	pilO	357563..358303 (+)	741	WP_272334171.1	type 4a pilus biogenesis protein PilO	Machinery gene
RW078_RS01695 (RW078_01695)	pilP	358314..358841 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
RW078_RS01700 (RW078_01700)	pilQ	358904..361069 (+)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
RW078_RS01705 (RW078_01705)	aroK	361081..361650 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=889405 RW078_RS01680 WP_002014066.1 355867..356925(+) (pilM) [Acinetobacter baumannii strain ABO21-A045]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=889405 RW078_RS01680 WP_002014066.1 355867..356925(+) (pilM) [Acinetobacter baumannii strain ABO21-A045]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACGGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGACTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCAGAGCGAAAAAAGATCGTTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGCTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCTAAGCTTTTGCAGCAAAAATTAGGTTATCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCCTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423