Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | RUL31_RS00575 | Genome accession | NZ_CP135964 |
| Coordinates | 103481..105919 (+) | Length | 812 a.a. |
| NCBI ID | WP_003328317.1 | Uniprot ID | - |
| Organism | Bacillus atrophaeus strain CD303 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 98481..110919
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RUL31_RS00560 (RUL31_00560) | ctsR | 101358..101822 (+) | 465 | WP_003328320.1 | transcriptional regulator CtsR | - |
| RUL31_RS00565 (RUL31_00565) | - | 101836..102393 (+) | 558 | WP_106361264.1 | UvrB/UvrC motif-containing protein | - |
| RUL31_RS00570 (RUL31_00570) | - | 102393..103484 (+) | 1092 | WP_010787416.1 | protein arginine kinase | - |
| RUL31_RS00575 (RUL31_00575) | clpC | 103481..105919 (+) | 2439 | WP_003328317.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| RUL31_RS00580 (RUL31_00580) | radA | 106004..107383 (+) | 1380 | WP_106048265.1 | DNA repair protein RadA | Machinery gene |
| RUL31_RS00585 (RUL31_00585) | disA | 107387..108469 (+) | 1083 | WP_010787418.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| RUL31_RS00590 (RUL31_00590) | - | 108590..109690 (+) | 1101 | WP_003328314.1 | PIN/TRAM domain-containing protein | - |
| RUL31_RS00595 (RUL31_00595) | ispD | 109704..110402 (+) | 699 | WP_088116361.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| RUL31_RS00600 (RUL31_00600) | ispF | 110395..110871 (+) | 477 | WP_003328312.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 812 a.a. Molecular weight: 90364.87 Da Isoelectric Point: 5.9519
>NTDB_id=887785 RUL31_RS00575 WP_003328317.1 103481..105919(+) (clpC) [Bacillus atrophaeus strain CD303]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSASGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSVDESVQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKTWKEKQGQENSEVSVEDIAMVV
SSWTGVPVSKIAQTETDKLLNMENLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFVFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLN
EIVTLMSDQLTKRLKEQDLSIELTEAAKAKVADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLDVEDGE
FVVKTTAKTNNL
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSASGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSVDESVQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKTWKEKQGQENSEVSVEDIAMVV
SSWTGVPVSKIAQTETDKLLNMENLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFVFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLN
EIVTLMSDQLTKRLKEQDLSIELTEAAKAKVADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIDKGQHIVLDVEDGE
FVVKTTAKTNNL
Nucleotide
Download Length: 2439 bp
>NTDB_id=887785 RUL31_RS00575 WP_003328317.1 103481..105919(+) (clpC) [Bacillus atrophaeus strain CD303]
ATGATGTTTGGAAGATTTACAGAGCGCGCGCAAAAGGTATTGGCACTTGCACAGGAGGAAGCACTTCGTTTAGGGCATAA
CAATATTGGCACAGAGCATATTTTATTGGGACTGGTACGCGAAGGAGAAGGTATTGCAGCTAAAGCGCTTCAAGCACTTG
GCCTCGGTTCTGATAAAATCCAAAAAGAAGTGGAGAGCTTAATTGGACGCGGACAAGAAATGTCCCAAACCATTCATTAT
ACTCCGAGAGCTAAAAAAGTGATTGAGCTTTCAATGGATGAGGCAAGAAAACTTGGCCATTCTTACGTAGGGACAGAACA
TATCCTTCTCGGACTCATACGCGAAGGAGAAGGTGTGGCAGCGAGAGTGCTGAATAACCTTGGCGTAAGTTTAAATAAAG
CGAGACAGCAGGTTCTCCAGCTTCTTGGAAGCAATGAAACAGGATCTTCTGCCTCAGGAACAAACAGCAATGCAAATACT
CCGACGCTTGACAGCTTGGCGAGAGATTTAACGGCGATAGCGAAGGAAGACAGCCTTGATCCGGTTATCGGCAGAAGCAA
GGAAATTCAGCGGGTAATTGAAGTGCTGAGCCGCAGAACGAAAAACAATCCTGTGCTTATCGGGGAACCGGGTGTAGGGA
AAACGGCTATTGCTGAAGGGCTTGCACAGCAAATCATCAACAATGAAGTTCCTGAAATCTTGCGCGATAAACGTGTTATG
ACATTAGACATGGGAACGGTCGTTGCCGGCACAAAGTACCGTGGTGAATTTGAAGACCGTTTGAAAAAGGTAATGGATGA
AATTCGACAAGCAGGCAATATTATTCTCTTTATTGATGAGCTTCATACATTGATAGGGGCAGGCGGAGCAGAAGGTGCGA
TTGATGCATCAAATATTTTAAAGCCGTCACTTGCCCGCGGAGAGCTGCAATGCATCGGGGCGACCACTCTTGATGAGTAC
CGCAAATATATTGAAAAAGATGCAGCGCTTGAGCGCCGATTCCAACCAATCCAGGTTGATCAGCCTTCTGTAGACGAAAG
CGTTCAAATATTAAGAGGGTTACGTGACCGATATGAAGCGCATCACCGGGTTTCAATTACTGATGAAGCCATTGAAGCTG
CGGTTAAGCTTTCTGACCGGTATATTTCTGATCGGTTCCTTCCGGATAAAGCAATTGATTTGATTGATGAAGCAGGTTCT
AAAGTAAGATTGCGTTCATTTACAACTCCACCAAATTTGAAGGAGCTTGAACAAAAACTTGATGAAGTCCGTAAAGAAAA
AGATGCAGCGGTGCAAAGCCAAGAGTTTGAAAAAGCCGCCTCATTACGCGATACAGAACAGCGTTTAAGAGAACAAGTGG
AAGATACGAAGAAAACGTGGAAAGAGAAACAAGGCCAGGAAAATTCAGAAGTATCGGTTGAAGATATCGCAATGGTTGTT
TCAAGTTGGACCGGGGTTCCTGTTTCTAAAATTGCGCAAACTGAAACGGATAAGCTGCTGAATATGGAAAATCTCCTTCA
TTCCCGTGTTATCGGGCAGGATGAAGCCGTTGTAGCTGTTGCTAAGGCTGTCAGACGCGCGAGAGCAGGGTTGAAAGACC
CGAAACGGCCGATTGGTTCATTCGTATTCTTAGGCCCTACAGGTGTAGGGAAAACCGAGCTTGCAAGAGCACTTGCTGAA
TCCATTTTCGGTGATGAAGAAGCGATGATCAGAATCGATATGTCAGAATACATGGAGAAACACTCGACATCAAGACTTGT
CGGTTCACCTCCTGGATATGTCGGTTATGATGAAGGCGGTCAGTTAACAGAAAAAGTTAGAAGAAAACCATACTCTGTTG
TGCTGCTTGATGAAATTGAAAAAGCGCATCCGGATGTATTCAATATTCTTTTACAAGTGCTTGAAGATGGCCGTCTGACT
GATTCGAAGGGACGCACAGTTGATTTCCGCAATACAATTCTTATCATGACGTCGAACGTCGGAGCCAGCGAGCTGAAACG
CAATAAGTACGTTGGTTTTAATGTTCAGGATGAGACTCAAAATCACAAAGACATGAAAGATAAAGTAATGGGTGAGCTGA
AACGGGCATTCAGACCGGAGTTTATCAACCGTATTGATGAAATCATTGTATTCCACTCACTCGAGAAGAAACATCTGAAT
GAAATTGTGACACTTATGTCGGATCAATTAACAAAACGCCTAAAAGAACAAGACCTATCAATTGAGCTGACAGAAGCTGC
AAAAGCGAAAGTAGCTGATGAAGGGGTAGATCTGGAGTACGGCGCCCGTCCGTTAAGAAGAGCAATTCAAAAGCATGTAG
AAGACCGTTTATCAGAGGAACTGCTTAGAGGAAATATTGATAAAGGTCAGCATATTGTGCTTGATGTTGAAGATGGAGAG
TTTGTCGTAAAAACGACAGCTAAAACGAATAATTTATAA
ATGATGTTTGGAAGATTTACAGAGCGCGCGCAAAAGGTATTGGCACTTGCACAGGAGGAAGCACTTCGTTTAGGGCATAA
CAATATTGGCACAGAGCATATTTTATTGGGACTGGTACGCGAAGGAGAAGGTATTGCAGCTAAAGCGCTTCAAGCACTTG
GCCTCGGTTCTGATAAAATCCAAAAAGAAGTGGAGAGCTTAATTGGACGCGGACAAGAAATGTCCCAAACCATTCATTAT
ACTCCGAGAGCTAAAAAAGTGATTGAGCTTTCAATGGATGAGGCAAGAAAACTTGGCCATTCTTACGTAGGGACAGAACA
TATCCTTCTCGGACTCATACGCGAAGGAGAAGGTGTGGCAGCGAGAGTGCTGAATAACCTTGGCGTAAGTTTAAATAAAG
CGAGACAGCAGGTTCTCCAGCTTCTTGGAAGCAATGAAACAGGATCTTCTGCCTCAGGAACAAACAGCAATGCAAATACT
CCGACGCTTGACAGCTTGGCGAGAGATTTAACGGCGATAGCGAAGGAAGACAGCCTTGATCCGGTTATCGGCAGAAGCAA
GGAAATTCAGCGGGTAATTGAAGTGCTGAGCCGCAGAACGAAAAACAATCCTGTGCTTATCGGGGAACCGGGTGTAGGGA
AAACGGCTATTGCTGAAGGGCTTGCACAGCAAATCATCAACAATGAAGTTCCTGAAATCTTGCGCGATAAACGTGTTATG
ACATTAGACATGGGAACGGTCGTTGCCGGCACAAAGTACCGTGGTGAATTTGAAGACCGTTTGAAAAAGGTAATGGATGA
AATTCGACAAGCAGGCAATATTATTCTCTTTATTGATGAGCTTCATACATTGATAGGGGCAGGCGGAGCAGAAGGTGCGA
TTGATGCATCAAATATTTTAAAGCCGTCACTTGCCCGCGGAGAGCTGCAATGCATCGGGGCGACCACTCTTGATGAGTAC
CGCAAATATATTGAAAAAGATGCAGCGCTTGAGCGCCGATTCCAACCAATCCAGGTTGATCAGCCTTCTGTAGACGAAAG
CGTTCAAATATTAAGAGGGTTACGTGACCGATATGAAGCGCATCACCGGGTTTCAATTACTGATGAAGCCATTGAAGCTG
CGGTTAAGCTTTCTGACCGGTATATTTCTGATCGGTTCCTTCCGGATAAAGCAATTGATTTGATTGATGAAGCAGGTTCT
AAAGTAAGATTGCGTTCATTTACAACTCCACCAAATTTGAAGGAGCTTGAACAAAAACTTGATGAAGTCCGTAAAGAAAA
AGATGCAGCGGTGCAAAGCCAAGAGTTTGAAAAAGCCGCCTCATTACGCGATACAGAACAGCGTTTAAGAGAACAAGTGG
AAGATACGAAGAAAACGTGGAAAGAGAAACAAGGCCAGGAAAATTCAGAAGTATCGGTTGAAGATATCGCAATGGTTGTT
TCAAGTTGGACCGGGGTTCCTGTTTCTAAAATTGCGCAAACTGAAACGGATAAGCTGCTGAATATGGAAAATCTCCTTCA
TTCCCGTGTTATCGGGCAGGATGAAGCCGTTGTAGCTGTTGCTAAGGCTGTCAGACGCGCGAGAGCAGGGTTGAAAGACC
CGAAACGGCCGATTGGTTCATTCGTATTCTTAGGCCCTACAGGTGTAGGGAAAACCGAGCTTGCAAGAGCACTTGCTGAA
TCCATTTTCGGTGATGAAGAAGCGATGATCAGAATCGATATGTCAGAATACATGGAGAAACACTCGACATCAAGACTTGT
CGGTTCACCTCCTGGATATGTCGGTTATGATGAAGGCGGTCAGTTAACAGAAAAAGTTAGAAGAAAACCATACTCTGTTG
TGCTGCTTGATGAAATTGAAAAAGCGCATCCGGATGTATTCAATATTCTTTTACAAGTGCTTGAAGATGGCCGTCTGACT
GATTCGAAGGGACGCACAGTTGATTTCCGCAATACAATTCTTATCATGACGTCGAACGTCGGAGCCAGCGAGCTGAAACG
CAATAAGTACGTTGGTTTTAATGTTCAGGATGAGACTCAAAATCACAAAGACATGAAAGATAAAGTAATGGGTGAGCTGA
AACGGGCATTCAGACCGGAGTTTATCAACCGTATTGATGAAATCATTGTATTCCACTCACTCGAGAAGAAACATCTGAAT
GAAATTGTGACACTTATGTCGGATCAATTAACAAAACGCCTAAAAGAACAAGACCTATCAATTGAGCTGACAGAAGCTGC
AAAAGCGAAAGTAGCTGATGAAGGGGTAGATCTGGAGTACGGCGCCCGTCCGTTAAGAAGAGCAATTCAAAAGCATGTAG
AAGACCGTTTATCAGAGGAACTGCTTAGAGGAAATATTGATAAAGGTCAGCATATTGTGCTTGATGTTGAAGATGGAGAG
TTTGTCGTAAAAACGACAGCTAAAACGAATAATTTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
98.025 |
99.754 |
0.978 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.625 |
98.522 |
0.489 |
| clpC | Streptococcus thermophilus LMD-9 |
46.481 |
100 |
0.472 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.238 |
100 |
0.469 |
| clpC | Streptococcus pneumoniae Rx1 |
45.365 |
99.631 |
0.452 |
| clpC | Streptococcus pneumoniae D39 |
45.365 |
99.631 |
0.452 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.241 |
99.631 |
0.451 |
| clpC | Streptococcus mutans UA159 |
43.826 |
100 |
0.446 |
| clpE | Streptococcus mutans UA159 |
53.005 |
79.926 |
0.424 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
50 |
84.729 |
0.424 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.234 |
79.926 |
0.417 |
| clpE | Streptococcus pneumoniae Rx1 |
52.234 |
79.926 |
0.417 |
| clpE | Streptococcus pneumoniae D39 |
52.234 |
79.926 |
0.417 |
| clpE | Streptococcus pneumoniae R6 |
52.234 |
79.926 |
0.417 |