Detailed information NTG0887042

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: RSK81_RS09300
• Genome accession: NZ_CP135591
• Coordinates: 1879601..1880218 (-)
• Length: 205 a.a.
• NCBI ID: WP_223310285.1
• Uniprot ID: A0AA96NTH7
• Organism: Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A
• Function: degradation of ComX; degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 1874601..1885218

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RSK81_RS09275 (RSK81_09275)	-	1875086..1875850 (-)	765	WP_002923617.1	ABC transporter ATP-binding protein	-
RSK81_RS09280 (RSK81_09280)	-	1875850..1876803 (-)	954	WP_002923615.1	branched-chain amino acid ABC transporter permease	-
RSK81_RS09285 (RSK81_09285)	-	1876807..1877676 (-)	870	WP_002897070.1	branched-chain amino acid ABC transporter permease	-
RSK81_RS09290 (RSK81_09290)	-	1877922..1879082 (-)	1161	WP_002894677.1	ABC transporter substrate-binding protein	-
RSK81_RS09295 (RSK81_09295)	-	1879171..1879440 (-)	270	WP_002918525.1	YlbG family protein	-
RSK81_RS09300 (RSK81_09300)	clpP	1879601..1880218 (-)	618	WP_223310285.1	ATP-dependent Clp protease proteolytic subunit	Regulator
RSK81_RS09305 (RSK81_09305)	upp	1880299..1880928 (-)	630	WP_002894672.1	uracil phosphoribosyltransferase	-
RSK81_RS09310 (RSK81_09310)	mgtA	1881026..1883686 (-)	2661	WP_125434778.1	magnesium-translocating P-type ATPase	-
RSK81_RS09315 (RSK81_09315)	-	1883844..1884455 (-)	612	WP_009659077.1	glutathione S-transferase family protein	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 22712.94 Da
• Isoelectric Point: 4.7792

>NTDB_id=887042 RSK81_RS09300 WP_223310285.1 1879601..1880218(-) (clpP) [Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A]
MLKREREKTMIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSA
GLAIVDTMNFIKSDVQTIVMGVAASMGTIIASSGAKGKRFMLPNAEYLIHQPMGGAGSGTQQTDMAIVAEHLLRTRNTLE
KILAENSGKSVEQIHKDAERDYWMSAQETLEYGFIDEIMENSNLS

Nucleotide

• Length: 618 bp

>NTDB_id=887042 RSK81_RS09300 WP_223310285.1 1879601..1880218(-) (clpP) [Streptococcus sp. DTU_2020_1000888_1_SI_GRL_NUU_041A]
ATTTTAAAAAGAGAAAGAGAGAAAACTATGATTCCTGTAGTTATTGAACAAACCAGCCGAGGGGAGCGCTCCTATGATAT
TTACTCCCGGCTATTAAAAGATCGGATTATCATGCTGACTGGCCCAGTAGAGGACAATATGGCTAATTCAGTCATTGCCC
AGCTCCTTTTCTTGGATGCACAGGACAATACTAAAGATATTTATCTCTATGTGAATACGCCGGGCGGATCCGTTTCAGCA
GGTCTGGCTATTGTGGATACTATGAACTTCATCAAGTCTGATGTTCAGACCATTGTTATGGGTGTAGCTGCCAGCATGGG
AACAATCATTGCTTCCAGTGGTGCTAAGGGCAAACGATTCATGCTGCCAAATGCAGAATATCTGATTCACCAGCCAATGG
GCGGAGCTGGAAGCGGTACTCAGCAGACGGATATGGCCATTGTAGCTGAGCACTTACTTAGAACTCGGAATACCTTGGAA
AAAATCTTGGCTGAAAACTCTGGCAAGTCCGTTGAGCAAATCCACAAGGATGCGGAACGCGATTACTGGATGAGTGCTCA
GGAAACCTTGGAATACGGCTTTATTGATGAAATCATGGAAAATAGCAATCTGAGCTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (20-201)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pneumoniae R6	90.306	95.61	0.863
clpP	Streptococcus pneumoniae Rx1	90.306	95.61	0.863
clpP	Streptococcus pneumoniae D39	90.306	95.61	0.863
clpP	Streptococcus pneumoniae TIGR4	90.306	95.61	0.863
clpP	Streptococcus pyogenes JRS4	89.744	95.122	0.854
clpP	Streptococcus pyogenes MGAS315	89.744	95.122	0.854
clpP	Streptococcus mutans UA159	87.5	97.561	0.854
clpP	Streptococcus thermophilus LMG 18311	88.718	95.122	0.844
clpP	Streptococcus thermophilus LMD-9	88.718	95.122	0.844
clpP	Lactococcus lactis subsp. cremoris KW2	87.692	95.122	0.834
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	87.179	95.122	0.829
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.585	94.146	0.561
clpP	Bacillus subtilis subsp. subtilis str. 168	56.477	94.146	0.532