Detailed information NTG0886551

Bioinformatically predicted

Overview

• Name: dprA/cilB/dalA
• Type: Machinery gene
• Locus tag: RRU92_RS06405
• Genome accession: NZ_CP135436
• Coordinates: 1331669..1332526 (+)
• Length: 285 a.a.
• NCBI ID: WP_152904343.1
• Uniprot ID: -
• Organism: Streptococcus sp. DTU_2020_1001019_1_SI_AUS_MUR_006
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1326669..1337526

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RRU92_RS06390 (RRU92_06390)	-	1328600..1329343 (+)	744	WP_075232433.1	class A sortase	-
RRU92_RS06395 (RRU92_06395)	-	1329499..1330575 (+)	1077	WP_315639008.1	aspartate-semialdehyde dehydrogenase	-
RRU92_RS06400 (RRU92_06400)	dapA	1330626..1331561 (+)	936	WP_000121596.1	4-hydroxy-tetrahydrodipicolinate synthase	-
RRU92_RS06405 (RRU92_06405)	dprA/cilB/dalA	1331669..1332526 (+)	858	WP_152904343.1	DNA-processing protein DprA	Machinery gene
RRU92_RS06410 (RRU92_06410)	topA	1332645..1334732 (+)	2088	WP_315639009.1	type I DNA topoisomerase	-
RRU92_RS06415 (RRU92_06415)	-	1334991..1335350 (+)	360	WP_045763427.1	YbaN family protein	-
RRU92_RS06420 (RRU92_06420)	-	1335444..1336076 (+)	633	WP_315639010.1	copper homeostasis protein CutC	-
RRU92_RS06425 (RRU92_06425)	-	1336120..1336776 (+)	657	WP_315639011.1	MmcQ/YjbR family DNA-binding protein	-

Sequence

Protein

• Length: 285 a.a.
• Molecular weight: 31829.55 Da
• Isoelectric Point: 5.0985

>NTDB_id=886551 RRU92_RS06405 WP_152904343.1 1331669..1332526(+) (dprA/cilB/dalA) [Streptococcus sp. DTU_2020_1001019_1_SI_AUS_MUR_006]
MKIDNFEIYKLKQAGLSNQQVLKVLQYGEIYDQELTLETIAEASECRNPVVFMERYHKLTFESMERLRSDFEKFPSFSIL
DDVYPFALSEIYDAPVLLFYKGDLNLLKLPKIAVVGSRSCSQTGTKSVRKVIEELENELVIVSGLARGIDTAAHMSILQG
GGKTIAVIGTGLDVYYPRSNKRLQDYIGEYHLLLSEYGPGEEPLKYHFPARNRIIAGLCMGVIVAEAKMRSGSLITCERA
MEEGRDVFAIPGSILDGRSDGCHHLVQEGAKLVSSGQDVLAEFEF

Nucleotide

• Length: 858 bp

>NTDB_id=886551 RRU92_RS06405 WP_152904343.1 1331669..1332526(+) (dprA/cilB/dalA) [Streptococcus sp. DTU_2020_1001019_1_SI_AUS_MUR_006]
ATTAAGATTGATAATTTTGAGATTTATAAGTTGAAACAAGCAGGTTTAAGTAATCAACAGGTTTTAAAGGTACTTCAATA
TGGAGAAATCTATGATCAAGAATTAACCCTAGAAACGATAGCAGAAGCATCTGAGTGTAGAAATCCAGTAGTTTTTATGG
AACGTTACCATAAACTCACCTTTGAAAGTATGGAGAGATTAAGAAGTGACTTTGAAAAATTTCCCTCATTTTCAATTCTG
GACGATGTTTATCCCTTTGCTCTCAGTGAAATCTATGATGCTCCAGTATTGTTATTTTATAAGGGCGATTTAAATCTTTT
AAAGTTACCTAAGATTGCGGTTGTAGGCAGTCGCTCTTGTAGTCAAACAGGGACAAAATCAGTTCGTAAGGTTATTGAAG
AACTTGAGAATGAGCTGGTGATTGTGAGTGGGCTTGCTAGAGGGATTGATACTGCAGCGCATATGTCTATTCTTCAAGGT
GGTGGAAAAACTATTGCAGTTATAGGGACTGGCTTGGATGTCTATTATCCTCGATCTAATAAACGACTGCAGGACTACAT
CGGTGAATATCATTTGCTACTGAGTGAATATGGACCTGGTGAAGAACCCTTAAAATATCACTTTCCAGCACGAAATCGGA
TTATTGCTGGCCTATGTATGGGTGTTATCGTTGCTGAGGCAAAGATGAGATCTGGTAGTTTGATTACCTGTGAGCGAGCT
ATGGAAGAAGGAAGAGATGTTTTTGCTATTCCAGGTAGCATTTTAGACGGTCGTTCAGATGGTTGTCATCACTTGGTTCA
GGAAGGTGCAAAACTTGTTTCAAGTGGTCAGGATGTGCTAGCAGAATTTGAATTTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (79-274)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (3-60)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	79.298	100	0.793
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	78.947	100	0.789
dprA/cilB/dalA	Streptococcus pneumoniae D39	78.947	100	0.789
dprA/cilB/dalA	Streptococcus pneumoniae R6	78.947	100	0.789
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	78.947	100	0.789
dprA/cilB/dalA	Streptococcus mitis SK321	78.246	100	0.782
dprA	Streptococcus mutans UA159	61.131	99.298	0.607
dprA	Lactococcus lactis subsp. cremoris KW2	55.16	98.596	0.544
dprA	Legionella pneumophila strain ERS1305867	51.724	71.228	0.368
dprA	Latilactobacillus sakei subsp. sakei 23K	46.188	78.246	0.361