Detailed information NTG0886487

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: RRV45_RS19380
• Genome accession: NZ_CP135435
• Coordinates: 3874340..3874945 (+)
• Length: 201 a.a.
• NCBI ID: WP_315666293.1
• Uniprot ID: A0AA96MT15
• Organism: Bacillus sp. DTU_2020_1000418_1_SI_GHA_SEK_038
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3869340..3879945

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RRV45_RS19355 (RRV45_19355)	-	3869476..3869721 (-)	246	WP_315666289.1	glutaredoxin family protein	-
RRV45_RS19360 (RRV45_19360)	rpoN	3869760..3871097 (-)	1338	WP_315666290.1	RNA polymerase factor sigma-54	-
RRV45_RS19365 (RRV45_19365)	-	3871650..3873263 (+)	1614	WP_315666291.1	L-lactate permease	-
RRV45_RS19370 (RRV45_19370)	-	3873280..3873537 (+)	258	WP_315666292.1	hypothetical protein	-
RRV45_RS19380 (RRV45_19380)	clpP	3874340..3874945 (+)	606	WP_315666293.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
RRV45_RS19385 (RRV45_19385)	-	3874989..3875246 (-)	258	WP_315666294.1	HPr family phosphocarrier protein	-
RRV45_RS19390 (RRV45_19390)	whiA	3875277..3876218 (-)	942	WP_315666295.1	DNA-binding protein WhiA	-
RRV45_RS19395 (RRV45_19395)	-	3876570..3877553 (-)	984	WP_315666296.1	YvcK family protein	-
RRV45_RS19400 (RRV45_19400)	rapZ	3877550..3878443 (-)	894	WP_315666297.1	RNase adapter RapZ	-
RRV45_RS19405 (RRV45_19405)	-	3878471..3878929 (-)	459	WP_315669092.1	8-oxo-dGTP diphosphatase	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22263.64 Da
• Isoelectric Point: 4.9413

>NTDB_id=886487 RRV45_RS19380 WP_315666293.1 3874340..3874945(+) (clpP) [Bacillus sp. DTU_2020_1000418_1_SI_GHA_SEK_038]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDHVANSIVAQLLFLEAENPEKDITLYINSPGGSITAGMAIYDT
MQYIKADVSTVCIGMAASMGAFLLAAGEKGKRYVLPNSEVMIHQPLGGAQGQATEIEIAAKRILFLRDKLNTILSERTGQ
PLEVIARDTDRDNFMTAERALEYGLVDKIITRLDEKKDKDK

Nucleotide

• Length: 606 bp

>NTDB_id=886487 RRV45_RS19380 WP_315666293.1 3874340..3874945(+) (clpP) [Bacillus sp. DTU_2020_1000418_1_SI_GHA_SEK_038]
ATGAACTTAATCCCTACAGTTATTGAACAAACAAACAGGGGAGAGCGTGCGTATGATATTTACTCCCGTCTTTTAAAAGA
CCGTATAATTATGCTTGGAAGCGCGATTGATGATCATGTGGCAAACTCTATTGTCGCTCAATTGCTATTCCTTGAAGCAG
AAAACCCTGAGAAGGATATTACCTTGTACATTAACAGCCCAGGCGGAAGCATTACAGCGGGCATGGCGATTTATGACACG
ATGCAATATATTAAAGCTGACGTATCAACAGTATGTATCGGAATGGCAGCTTCTATGGGTGCTTTCCTGCTTGCAGCAGG
TGAAAAAGGCAAGCGCTACGTACTTCCAAATAGTGAAGTGATGATTCATCAGCCACTTGGAGGCGCACAAGGGCAAGCGA
CTGAAATTGAAATTGCTGCAAAACGCATTTTATTCCTGCGTGACAAGCTTAACACGATTCTTTCTGAGCGCACAGGTCAG
CCGCTTGAAGTGATTGCTCGTGACACAGACCGCGACAACTTCATGACTGCTGAAAGAGCTCTTGAATACGGTTTGGTCGA
TAAAATTATTACTCGTTTAGATGAGAAAAAGGATAAGGATAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-191)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	87.31	98.01	0.856
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.368	94.527	0.637
clpP	Streptococcus thermophilus LMG 18311	57.592	95.025	0.547
clpP	Streptococcus thermophilus LMD-9	57.592	95.025	0.547
clpP	Lactococcus lactis subsp. cremoris KW2	57.368	94.527	0.542
clpP	Streptococcus pneumoniae D39	56.842	94.527	0.537
clpP	Streptococcus pneumoniae Rx1	56.842	94.527	0.537
clpP	Streptococcus pneumoniae R6	56.842	94.527	0.537
clpP	Streptococcus pneumoniae TIGR4	56.842	94.527	0.537
clpP	Streptococcus mutans UA159	54.974	95.025	0.522
clpP	Streptococcus pyogenes JRS4	55.263	94.527	0.522
clpP	Streptococcus pyogenes MGAS315	55.263	94.527	0.522
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	55.263	94.527	0.522