Detailed information NTG0884752

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: RMQ62_RS09235
• Genome accession: NZ_CP135065
• Coordinates: 1910918..1911529 (+)
• Length: 203 a.a.
• NCBI ID: WP_223375679.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ID24665
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1905918..1916529

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RMQ62_RS09215 (RMQ62_09215)	-	1906076..1906906 (+)	831	WP_009910491.1	carbohydrate ABC transporter permease	-
RMQ62_RS09220 (RMQ62_09220)	gtfA	1906976..1908424 (+)	1449	WP_313681050.1	sucrose phosphorylase	-
RMQ62_RS09225 (RMQ62_09225)	-	1908497..1910113 (+)	1617	WP_313741792.1	alpha-glucosidase	-
RMQ62_RS09230 (RMQ62_09230)	upp	1910193..1910822 (+)	630	WP_012027487.1	uracil phosphoribosyltransferase	-
RMQ62_RS09235 (RMQ62_09235)	clpP	1910918..1911529 (+)	612	WP_223375679.1	ATP-dependent Clp protease proteolytic subunit	Regulator
RMQ62_RS09240 (RMQ62_09240)	-	1911656..1911928 (+)	273	WP_109371668.1	YlbG family protein	-
RMQ62_RS09245 (RMQ62_09245)	-	1912060..1913229 (+)	1170	WP_044668681.1	ABC transporter substrate-binding protein	-
RMQ62_RS09250 (RMQ62_09250)	-	1913430..1914317 (+)	888	WP_012027482.1	branched-chain amino acid ABC transporter permease	-
RMQ62_RS09255 (RMQ62_09255)	-	1914320..1915267 (+)	948	WP_002937293.1	branched-chain amino acid ABC transporter permease	-
RMQ62_RS09260 (RMQ62_09260)	-	1915267..1916031 (+)	765	WP_002937291.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 203 a.a.
• Molecular weight: 22345.73 Da
• Isoelectric Point: 6.7324

>NTDB_id=884752 RMQ62_RS09235 WP_223375679.1 1910918..1911529(+) (clpP) [Streptococcus suis strain ID24665]
MSKRSNFMIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDPTKDIYLYVNTPGGSVSAGL
AIVDTMNFIKADVQTIVMGTAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNKLEKI
LADNSGKTVKQIHKDAERDYWMSAEETLAYGFIDQIMDNTKVK

Nucleotide

• Length: 612 bp

>NTDB_id=884752 RMQ62_RS09235 WP_223375679.1 1910918..1911529(+) (clpP) [Streptococcus suis strain ID24665]
ATCTCGAAAAGGAGTAATTTTATGATTCCAGTAGTTATTGAACAAACTAGCCGTGGTGAGCGCTCGTATGATATTTATTC
CCGTTTGCTCAAGGATCGCATTATCATGTTGACAGGACCAGTTGAGGACAACATGGCTAATTCGATTATTGCACAATTGC
TTTTCCTTGATGCCCAAGATCCTACAAAGGATATTTACCTCTATGTTAATACGCCAGGAGGATCGGTGTCAGCAGGTCTT
GCCATTGTAGACACGATGAATTTCATTAAAGCTGATGTTCAAACCATCGTTATGGGAACAGCTGCGAGCATGGGAACCAT
CATTGCATCAAGCGGAGCCAAGGGCAAACGTTTCATGTTGCCAAATGCAGAGTACATGATTCACCAACCGATGGGTGGAA
CAGGTGGTGGCACTCAGCAAACAGACATGGCTATTGCAGCAGAGCACCTATTAAAAACACGTAATAAGTTAGAAAAAATC
TTGGCAGACAATTCAGGTAAGACAGTCAAGCAAATCCATAAGGATGCAGAACGTGATTACTGGATGTCAGCAGAAGAAAC
CTTGGCTTACGGATTTATTGACCAGATTATGGACAATACAAAAGTCAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (18-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes JRS4	92.347	96.552	0.892
clpP	Streptococcus pyogenes MGAS315	92.347	96.552	0.892
clpP	Streptococcus mutans UA159	90.306	96.552	0.872
clpP	Streptococcus thermophilus LMD-9	88.776	96.552	0.857
clpP	Streptococcus thermophilus LMG 18311	88.776	96.552	0.857
clpP	Streptococcus pneumoniae R6	89.231	96.059	0.857
clpP	Streptococcus pneumoniae Rx1	89.231	96.059	0.857
clpP	Streptococcus pneumoniae D39	89.231	96.059	0.857
clpP	Streptococcus pneumoniae TIGR4	89.231	96.059	0.857
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	83.756	97.044	0.813
clpP	Lactococcus lactis subsp. cremoris KW2	83.249	97.044	0.808
clpP	Bacillus subtilis subsp. subtilis str. 168	58.163	96.552	0.562
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.549	95.074	0.557