Detailed information NTG0884626

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: RPB93_RS13225
• Genome accession: NZ_CP135060
• Coordinates: 2593840..2594421 (+)
• Length: 193 a.a.
• NCBI ID: WP_025709468.1
• Uniprot ID: -
• Organism: Bacillus cereus strain B126_1
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2588840..2599421

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RPB93_RS13200 (RPB93_13200)	-	2589960..2591327 (+)	1368	WP_001065145.1	lytic polysaccharide monooxygenase	-
RPB93_RS13205 (RPB93_13205)	-	2591453..2591887 (-)	435	WP_001190865.1	GNAT family N-acetyltransferase	-
RPB93_RS13210 (RPB93_13210)	rpiA	2592002..2592664 (-)	663	WP_044306431.1	ribose 5-phosphate isomerase A	-
RPB93_RS13215 (RPB93_13215)	-	2592669..2592989 (-)	321	WP_001125388.1	2Fe-2S iron-sulfur cluster-binding protein	-
RPB93_RS13220 (RPB93_13220)	-	2593132..2593818 (+)	687	WP_016122653.1	RNA polymerase subunit sigma-70	-
RPB93_RS13225 (RPB93_13225)	clpP	2593840..2594421 (+)	582	WP_025709468.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
RPB93_RS13230 (RPB93_13230)	-	2594465..2595322 (-)	858	WP_001227615.1	glycine betaine ABC transporter substrate-binding protein	-
RPB93_RS13235 (RPB93_13235)	-	2595494..2596699 (+)	1206	WP_000370606.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
RPB93_RS13240 (RPB93_13240)	-	2596692..2597528 (+)	837	WP_001084759.1	proline/glycine betaine ABC transporter permease	-
RPB93_RS13245 (RPB93_13245)	-	2597582..2597818 (-)	237	WP_025709465.1	hypothetical protein	-
RPB93_RS13250 (RPB93_13250)	-	2598036..2598203 (+)	168	WP_000508397.1	hypothetical protein	-
RPB93_RS13255 (RPB93_13255)	-	2598295..2598786 (+)	492	WP_025709464.1	HIT family protein	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21261.51 Da
• Isoelectric Point: 5.3195

>NTDB_id=884626 RPB93_RS13225 WP_025709468.1 2593840..2594421(+) (clpP) [Bacillus cereus strain B126_1]
MHTIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDDVVTKK

Nucleotide

• Length: 582 bp

>NTDB_id=884626 RPB93_RS13225 WP_025709468.1 2593840..2594421(+) (clpP) [Bacillus cereus strain B126_1]
ATGCATACAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGCATTATTATTATCGGCTCAGAAATTAACGATCAAGTAGCGAGTAGTGTCGTAGCGCAATTATTATTTTTAGAAGCAG
AAGATGCAGAAAAAGATATATATTTATACATCAATAGCCCAGGAGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTATGCATGGGCTTTGCGGCATCATTCGGTGCATTGTTATTATTATCAGG
AGCAAAAGGAAAACGGTTTGCGCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGCCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGCATATGGGATTGTAGA
TGACGTTGTTACGAAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	68.063	98.964	0.674
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.725	97.927	0.663
clpP	Streptococcus pyogenes JRS4	56.614	97.927	0.554
clpP	Streptococcus pyogenes MGAS315	56.614	97.927	0.554
clpP	Streptococcus pneumoniae R6	55.729	99.482	0.554
clpP	Streptococcus pneumoniae TIGR4	55.729	99.482	0.554
clpP	Streptococcus pneumoniae Rx1	55.729	99.482	0.554
clpP	Streptococcus thermophilus LMG 18311	55.729	99.482	0.554
clpP	Streptococcus thermophilus LMD-9	55.729	99.482	0.554
clpP	Streptococcus pneumoniae D39	55.729	99.482	0.554
clpP	Streptococcus mutans UA159	54.497	97.927	0.534
clpP	Lactococcus lactis subsp. cremoris KW2	52.356	98.964	0.518
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	50.262	98.964	0.497