Detailed information NTG0881728

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: RKQ58_RS02390
• Genome accession: NZ_CP134579
• Coordinates: 308909..309967 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain XH1034
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 303909..314967

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RKQ58_RS02375 (RKQ58_02375)	-	305015..305347 (+)	333	WP_000169598.1	hypothetical protein	-
RKQ58_RS02380 (RKQ58_02380)	-	305350..306174 (+)	825	WP_002019666.1	putative RNA methyltransferase	-
RKQ58_RS02385 (RKQ58_02385)	ponA	306192..308747 (-)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
RKQ58_RS02390 (RKQ58_02390)	pilM	308909..309967 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
RKQ58_RS02395 (RKQ58_02395)	-	309967..310569 (+)	603	Protein_284	PilN domain-containing protein	-
RKQ58_RS02400 (RKQ58_02400)	pilO	310604..311344 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
RKQ58_RS02405 (RKQ58_02405)	pilP	311355..311882 (+)	528	WP_000695059.1	pilus assembly protein PilP	Machinery gene
RKQ58_RS02410 (RKQ58_02410)	pilQ	311945..314071 (+)	2127	WP_272376894.1	type IV pilus secretin PilQ	Machinery gene
RKQ58_RS02415 (RKQ58_02415)	aroK	314083..314652 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=881728 RKQ58_RS02390 WP_002014066.1 308909..309967(+) (pilM) [Acinetobacter baumannii strain XH1034]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=881728 RKQ58_RS02390 WP_002014066.1 308909..309967(+) (pilM) [Acinetobacter baumannii strain XH1034]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACGGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGACTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACTATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGCTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GGAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGCTACCGTGTCACGATTGCCAACCCGTTCTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCCTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423