Detailed information NTG0880267

Bioinformatically predicted

Overview

• Name: ciaR
• Type: Regulator
• Locus tag: RJW54_RS05525
• Genome accession: NZ_CP134487
• Coordinates: 1108388..1109059 (-)
• Length: 223 a.a.
• NCBI ID: WP_024385291.1
• Uniprot ID: A0A116K182
• Organism: Streptococcus suis strain MY1C3_3B
• Function: repress competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1103388..1114059

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJW54_RS05505 (RJW54_05485)	coaA	1103974..1104894 (+)	921	WP_024381359.1	type I pantothenate kinase	-
RJW54_RS05510 (RJW54_05490)	rpsT	1104953..1105201 (+)	249	WP_012027069.1	30S ribosomal protein S20	-
RJW54_RS05515 (RJW54_05495)	-	1105463..1106692 (-)	1230	WP_024394628.1	transglutaminase domain-containing protein	-
RJW54_RS05520 (RJW54_05500)	ciaH	1107016..1108395 (-)	1380	WP_024394629.1	cell wall metabolism sensor histidine kinase WalK	Regulator
RJW54_RS05525 (RJW54_05505)	ciaR	1108388..1109059 (-)	672	WP_024385291.1	response regulator transcription factor	Regulator
RJW54_RS05530	-	1109253..1109588 (-)	336	Protein_1059	hypothetical protein	-
RJW54_RS05535 (RJW54_05515)	phoU	1109754..1110410 (-)	657	WP_024394630.1	phosphate signaling complex protein PhoU	-
RJW54_RS05540 (RJW54_05520)	pstB	1110439..1111197 (-)	759	WP_002937614.1	phosphate ABC transporter ATP-binding protein PstB	-
RJW54_RS05545 (RJW54_05525)	pstB	1111209..1112012 (-)	804	WP_002937615.1	phosphate ABC transporter ATP-binding protein PstB	-
RJW54_RS05550 (RJW54_05530)	pstA	1112037..1112924 (-)	888	WP_002937616.1	phosphate ABC transporter permease PstA	-
RJW54_RS05555 (RJW54_05535)	pstC	1112914..1113831 (-)	918	WP_002937619.1	phosphate ABC transporter permease subunit PstC	-

Sequence

Protein

• Length: 223 a.a.
• Molecular weight: 25231.80 Da
• Isoelectric Point: 4.2183

>NTDB_id=880267 RJW54_RS05525 WP_024385291.1 1108388..1109059(-) (ciaR) [Streptococcus suis strain MY1C3_3B]
MIKILLVEDDLSLSNSVFDFLDDFADVMQVFDGEEGVYEAETGVYDLILLDLMLPEKDGFQVLKELREKGVTTPVLITTA
KESLEDKGHGFELGADDYLTKPFYLEELKMRIQALLKRAGKFNENTLTYGDVTVDLSTNSTTVNGEEVELLGKEFDLLVY
FLQNQNVILPKTQIFDRIWGFDSDTTISVVEVYVSKIRKKLKGTTFGENLQTLRSVGYILKNA

Nucleotide

• Length: 672 bp

>NTDB_id=880267 RJW54_RS05525 WP_024385291.1 1108388..1109059(-) (ciaR) [Streptococcus suis strain MY1C3_3B]
ATGATTAAAATATTGTTAGTGGAAGATGATTTAAGTCTATCAAATTCTGTTTTCGATTTCTTAGATGATTTTGCGGATGT
TATGCAGGTTTTTGATGGTGAAGAGGGCGTTTATGAGGCGGAAACAGGCGTTTATGATTTGATTCTTTTGGATTTAATGT
TGCCTGAAAAAGATGGCTTCCAAGTTTTGAAAGAATTACGTGAAAAAGGTGTTACGACACCTGTTCTGATTACAACAGCC
AAGGAAAGTCTAGAGGATAAAGGCCATGGTTTTGAATTGGGGGCTGATGACTATTTGACGAAACCGTTTTATTTAGAAGA
ATTGAAGATGCGAATTCAAGCTCTATTAAAACGAGCGGGTAAGTTTAATGAAAACACACTAACTTATGGGGACGTGACCG
TTGACTTATCGACAAACTCTACAACTGTAAATGGCGAAGAAGTTGAATTGCTAGGAAAAGAATTCGATCTACTAGTCTAC
TTCTTGCAAAATCAAAATGTTATCTTACCAAAAACTCAAATTTTTGACCGTATTTGGGGATTTGACAGTGACACTACTAT
TTCAGTAGTAGAAGTATATGTTTCTAAAATTAGGAAAAAGTTGAAAGGAACGACCTTCGGGGAAAATCTTCAAACCCTGC
GTAGTGTCGGGTACATTCTAAAAAATGCCTAA

Domains

Predicted by InterproScan.

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (145-220)

• Response regulator receiver domain (Response_reg) (4-112)

3D structure

• AlphaFold DB: A0A116K182

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ciaR	Streptococcus mutans UA159	90.135	100	0.901
ciaR	Streptococcus pneumoniae Rx1	88.789	100	0.888
ciaR	Streptococcus pneumoniae D39	88.789	100	0.888
ciaR	Streptococcus pneumoniae R6	88.789	100	0.888
ciaR	Streptococcus pneumoniae TIGR4	88.789	100	0.888
covR	Lactococcus lactis subsp. lactis strain DGCC12653	38.053	100	0.386
vicR	Streptococcus mutans UA159	35.47	100	0.372
covR	Streptococcus salivarius strain HSISS4	36.283	100	0.368