Detailed information NTG0879640

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: RJD40_RS07040
• Genome accession: NZ_CP134280
• Coordinates: 1536733..1538202 (-)
• Length: 489 a.a.
• NCBI ID: WP_418114232.1
• Uniprot ID: -
• Organism: Vibrio scophthalmi strain 21FBVib0106
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 1531733..1543202

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJD40_RS07025 (RJD40_07025)	-	1533151..1534341 (-)	1191	WP_418114229.1	glycosyltransferase family 4 protein	-
RJD40_RS07030 (RJD40_07030)	-	1534351..1535565 (-)	1215	WP_418114230.1	glycosyltransferase	-
RJD40_RS07035 (RJD40_07035)	-	1535688..1536755 (-)	1068	WP_418114231.1	glycosyltransferase family 4 protein	-
RJD40_RS07040 (RJD40_07040)	luxO	1536733..1538202 (-)	1470	WP_418114232.1	sigma-54-dependent transcriptional regulator	Regulator
RJD40_RS07045 (RJD40_07045)	-	1538238..1540541 (-)	2304	WP_418114233.1	response regulator	-
RJD40_RS07050 (RJD40_07050)	-	1540562..1541254 (-)	693	WP_418114234.1	chromosome partitioning protein ParA	-

Sequence

Protein

• Length: 489 a.a.
• Molecular weight: 54872.66 Da
• Isoelectric Point: 5.9703

>NTDB_id=879640 RJD40_RS07040 WP_418114232.1 1536733..1538202(-) (luxO) [Vibrio scophthalmi strain 21FBVib0106]
MKSKVLLIEDSTSLAVLYQQYVKDEPFDLFHVETGREAIAFIERNVPQLVILDLKLPDMDGQDILDWIVENQVPTSVIVA
TAHGSVDVAVNLLQKGAKDFIEKPIKADRLKTSINLHLQRAKLEDLVENIESKFDRQRFHGFIGSSLPMQGVYKIIDSVA
PTTASVFIIGESGTGKEVCAEAIHKESKRRDKPFIAINCGAIPKDLMESEIFGHLKGAFTGATTDRKGAATAANGGTMFL
DELCEMDLEMQKKLLRFLQTGTFTPLGANKEQKVDVRIICATNRDPLVEVEEGRFREDLYYRVHVVPIEMPPLRERGGDI
ATLATHFLKLYAKQDQKKFRTINKDAEAILKRYAWPGNVRQLQNILRNIVVLNNDERLAVEHLPAQVVQLRKAANVTRTA
SVDNHPSPAAQEHIVNENNHTATSQSESSNVSESTIRPMWQIEREAIQQAIELCDGNVLNAAVLLELSPSTVYRKKQAWE
TEDEQNFVQ

Nucleotide

• Length: 1470 bp

>NTDB_id=879640 RJD40_RS07040 WP_418114232.1 1536733..1538202(-) (luxO) [Vibrio scophthalmi strain 21FBVib0106]
ATGAAATCAAAAGTACTTTTAATCGAAGATTCGACCTCACTGGCAGTGTTGTATCAGCAGTATGTCAAAGACGAGCCTTT
TGATCTTTTTCACGTTGAAACAGGCCGTGAAGCGATCGCATTTATTGAGCGCAACGTCCCTCAGTTGGTGATCCTTGATC
TCAAGTTACCTGATATGGATGGCCAAGACATTCTCGACTGGATTGTTGAAAATCAAGTGCCAACGTCTGTGATTGTCGCG
ACCGCGCACGGTTCGGTTGATGTTGCCGTCAACTTGCTGCAGAAAGGCGCTAAAGATTTTATAGAAAAACCAATCAAAGC
CGACCGTTTGAAAACATCGATTAATCTGCACCTTCAACGTGCCAAACTCGAAGATTTGGTTGAAAACATTGAGAGCAAAT
TTGATCGCCAACGCTTCCATGGTTTTATTGGTAGTAGCCTACCGATGCAAGGTGTTTATAAAATAATCGACTCTGTAGCC
CCAACCACCGCCAGTGTGTTTATTATCGGCGAAAGTGGTACCGGTAAAGAAGTGTGCGCTGAAGCGATTCATAAAGAGAG
TAAGCGCCGTGATAAGCCGTTTATCGCAATCAACTGTGGCGCAATTCCTAAAGACTTGATGGAAAGTGAGATTTTTGGTC
ATCTAAAAGGAGCATTTACCGGAGCAACAACCGATAGAAAAGGCGCAGCGACAGCAGCCAATGGCGGCACGATGTTCCTT
GATGAACTATGCGAAATGGACTTGGAAATGCAGAAAAAATTGCTGCGTTTTCTCCAAACAGGCACGTTCACTCCTCTAGG
TGCCAACAAGGAACAAAAGGTTGATGTTCGCATTATTTGTGCGACCAACCGCGATCCTCTAGTGGAGGTTGAAGAAGGCC
GATTTAGAGAAGATTTATATTACCGCGTACATGTTGTGCCGATTGAAATGCCCCCACTACGCGAGCGCGGTGGTGACATT
GCCACACTTGCCACCCATTTTCTAAAACTGTACGCGAAGCAAGACCAGAAAAAATTCCGCACTATCAATAAAGACGCAGA
AGCGATCTTAAAACGTTACGCATGGCCAGGTAACGTGCGTCAATTACAGAACATACTGCGTAATATTGTCGTGCTCAATA
ACGATGAGCGTTTAGCGGTGGAGCATTTACCGGCACAAGTGGTGCAATTACGAAAAGCCGCCAACGTAACGCGAACGGCC
AGTGTCGATAATCACCCTTCCCCTGCCGCTCAAGAGCATATTGTGAATGAAAACAATCACACCGCCACGTCACAAAGCGA
GAGTTCCAATGTCAGTGAGTCGACCATTCGCCCTATGTGGCAGATTGAACGTGAAGCCATTCAGCAAGCGATTGAACTGT
GTGATGGCAACGTGCTCAATGCAGCAGTACTACTCGAACTGAGCCCTTCTACGGTTTACCGTAAAAAACAGGCTTGGGAA
ACAGAAGATGAACAAAACTTCGTCCAATGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (5-114)

• Sigma-54 interaction domain (Sigma54_activat) (143-309)

• Bacterial regulatory protein, Fis family (HTH_8) (439-475)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	51.266	96.933	0.497
pilR	Acinetobacter baumannii strain A118	36.81	100	0.368