Detailed information NTG0877780

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: RIM63_RS08500
• Genome accession: NZ_CP133952
• Coordinates: 1748516..1749106 (-)
• Length: 196 a.a.
• NCBI ID: WP_012677455.1
• Uniprot ID: A0A922T644
• Organism: Streptococcus equi subsp. zooepidemicus strain HT321
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1743516..1754106

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RIM63_RS08465 (RIM63_08465)	rsmI	1743860..1744726 (-)	867	WP_317583819.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
RIM63_RS08470 (RIM63_08470)	yabA	1744731..1745054 (-)	324	WP_012680029.1	DNA replication initiation control protein YabA	-
RIM63_RS08475 (RIM63_08475)	ricT	1745047..1745847 (-)	801	WP_012680030.1	regulatory iron-sulfur-containing complex subunit RicT	-
RIM63_RS08480 (RIM63_08480)	-	1745844..1746719 (-)	876	WP_317583821.1	DNA polymerase III subunit delta'	-
RIM63_RS08485 (RIM63_08485)	tmk	1746733..1747368 (-)	636	WP_317583822.1	dTMP kinase	-
RIM63_RS08490 (RIM63_08490)	-	1747682..1747966 (-)	285	WP_043053379.1	YlbG family protein	-
RIM63_RS08495 (RIM63_08495)	-	1747967..1748413 (-)	447	WP_317583823.1	YlbF family regulator	-
RIM63_RS08500 (RIM63_08500)	clpP	1748516..1749106 (-)	591	WP_012677455.1	ATP-dependent Clp protease proteolytic subunit	Regulator
RIM63_RS08505 (RIM63_08505)	upp	1749337..1749966 (-)	630	WP_012516202.1	uracil phosphoribosyltransferase	-
RIM63_RS08510 (RIM63_08510)	-	1750116..1751747 (-)	1632	WP_317583825.1	polysaccharide biosynthesis protein	-
RIM63_RS08515 (RIM63_08515)	-	1751833..1753278 (+)	1446	WP_317583827.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21561.76 Da
• Isoelectric Point: 5.0281

>NTDB_id=877780 RIM63_RS08500 WP_012677455.1 1748516..1749106(-) (clpP) [Streptococcus equi subsp. zooepidemicus strain HT321]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELA

Nucleotide

• Length: 591 bp

>NTDB_id=877780 RIM63_RS08500 WP_012677455.1 1748516..1749106(-) (clpP) [Streptococcus equi subsp. zooepidemicus strain HT321]
ATGATTCCTGTAGTTATTGAACAAACCAGTCGTGGAGAGCGTTCTTATGACATTTATTCACGTCTGTTAAAGGACCGTAT
TATCATGCTGACTGGTCCAGTAGAGGATAATATGGCAAACTCTGTTATTGCGCAGCTCTTGTTTTTAGATGCCCAAGACA
ACACAAAAGACATTTACCTCTATGTGAATACCCCAGGAGGCTCTGTATCAGCTGGTCTAGCTATTGTGGATACGATGAAC
TTTATTAAGGCAGATGTGCAAACCATTGTTATGGGTATGGCTGCCTCTATGGGAACCGTTATTGCTTCATCAGGTGCAAA
GGGCAAGCGCTTTATGCTTCCAAATGCAGAGTACATGATTCACCAGCCTATGGGAGGCACAGGTGGTGGTACACAGCAGA
CAGATATGGCCATTGCGGCTGAGCATTTATTAAAGACACGTCACCGCTTGGAAAAGATTTTGGCACAAAATGCCGGTAAA
ACGATCAAACAAATCCATAAGGACGCTGAGCGTGATTACTGGATGAGCGCAGAAGAAACCCTAGCCTATGGCTTTATTGA
TGAAATTATGGAAAATAATGAGCTAGCTTAG

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	99.487	99.49	0.99
clpP	Streptococcus pyogenes JRS4	99.487	99.49	0.99
clpP	Streptococcus pneumoniae Rx1	91.282	99.49	0.908
clpP	Streptococcus pneumoniae D39	91.282	99.49	0.908
clpP	Streptococcus pneumoniae R6	91.282	99.49	0.908
clpP	Streptococcus mutans UA159	91.282	99.49	0.908
clpP	Streptococcus pneumoniae TIGR4	91.282	99.49	0.908
clpP	Streptococcus thermophilus LMG 18311	89.231	99.49	0.888
clpP	Streptococcus thermophilus LMD-9	89.231	99.49	0.888
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.641	99.49	0.852
clpP	Lactococcus lactis subsp. cremoris KW2	85.128	99.49	0.847
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.513	98.469	0.566
clpP	Bacillus subtilis subsp. subtilis str. 168	57.216	98.98	0.566