Detailed information NTG0877633

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: RIM62_RS02165
• Genome accession: NZ_CP133950
• Coordinates: 424541..425131 (+)
• Length: 196 a.a.
• NCBI ID: WP_012677455.1
• Uniprot ID: A0A922T644
• Organism: Streptococcus equi subsp. zooepidemicus strain ZHZ211
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 419541..430131

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RIM62_RS02150 (RIM62_02150)	-	420368..421813 (-)	1446	WP_043026474.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-
RIM62_RS02155 (RIM62_02155)	-	421899..423530 (+)	1632	WP_317583226.1	polysaccharide biosynthesis protein	-
RIM62_RS02160 (RIM62_02160)	upp	423680..424309 (+)	630	WP_012516202.1	uracil phosphoribosyltransferase	-
RIM62_RS02165 (RIM62_02165)	clpP	424541..425131 (+)	591	WP_012677455.1	ATP-dependent Clp protease proteolytic subunit	Regulator
RIM62_RS02170 (RIM62_02170)	-	425236..425682 (+)	447	WP_012516200.1	YlbF family regulator	-
RIM62_RS02175 (RIM62_02175)	-	425683..425967 (+)	285	WP_012516199.1	YlbG family protein	-
RIM62_RS02180 (RIM62_02180)	tmk	426283..426918 (+)	636	WP_012680032.1	dTMP kinase	-
RIM62_RS02185 (RIM62_02185)	-	426932..427807 (+)	876	WP_021321087.1	DNA polymerase III subunit delta'	-
RIM62_RS02190 (RIM62_02190)	ricT	427804..428604 (+)	801	WP_231197403.1	regulatory iron-sulfur-containing complex subunit RicT	-
RIM62_RS02195 (RIM62_02195)	yabA	428597..428920 (+)	324	WP_012516195.1	DNA replication initiation control protein YabA	-
RIM62_RS02200 (RIM62_02200)	rsmI	428925..429791 (+)	867	WP_165619413.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21561.76 Da
• Isoelectric Point: 5.0281

>NTDB_id=877633 RIM62_RS02165 WP_012677455.1 424541..425131(+) (clpP) [Streptococcus equi subsp. zooepidemicus strain ZHZ211]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELA

Nucleotide

• Length: 591 bp

>NTDB_id=877633 RIM62_RS02165 WP_012677455.1 424541..425131(+) (clpP) [Streptococcus equi subsp. zooepidemicus strain ZHZ211]
ATGATTCCTGTAGTTATTGAACAAACCAGTCGTGGAGAGCGTTCTTATGACATTTATTCACGTCTGTTAAAGGACCGTAT
TATCATGTTGACTGGTCCAGTAGAGGATAATATGGCAAACTCTGTTATTGCGCAGCTCTTGTTTTTAGATGCCCAAGACA
ACACAAAAGATATTTACCTCTATGTGAATACCCCAGGAGGCTCTGTATCAGCTGGTCTAGCTATTGTGGATACGATGAAC
TTTATTAAGGCAGATGTGCAAACCATTGTTATGGGTATGGCTGCCTCTATGGGAACCGTTATTGCTTCATCAGGTGCAAA
GGGCAAGCGCTTTATGCTTCCAAATGCAGAGTACATGATTCACCAGCCTATGGGAGGCACAGGTGGTGGTACACAGCAGA
CAGATATGGCCATTGCGGCTGAGCATTTATTAAAGACACGTCACCGCTTGGAAAAGATTTTGGCACAAAATGCCGGTAAA
ACGATCAAACAAATCCATAAGGACGCTGAGCGTGATTACTGGATGAGCGCAGAAGAGACCCTAGCCTATGGCTTTATTGA
TGAAATCATGGAAAATAATGAGCTAGCTTAG

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	99.487	99.49	0.99
clpP	Streptococcus pyogenes JRS4	99.487	99.49	0.99
clpP	Streptococcus pneumoniae Rx1	91.282	99.49	0.908
clpP	Streptococcus pneumoniae D39	91.282	99.49	0.908
clpP	Streptococcus pneumoniae R6	91.282	99.49	0.908
clpP	Streptococcus mutans UA159	91.282	99.49	0.908
clpP	Streptococcus pneumoniae TIGR4	91.282	99.49	0.908
clpP	Streptococcus thermophilus LMG 18311	89.231	99.49	0.888
clpP	Streptococcus thermophilus LMD-9	89.231	99.49	0.888
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.641	99.49	0.852
clpP	Lactococcus lactis subsp. cremoris KW2	85.128	99.49	0.847
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.513	98.469	0.566
clpP	Bacillus subtilis subsp. subtilis str. 168	57.216	98.98	0.566