Detailed information NTG0087608

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: TOL5_RS19750
• Genome accession: NZ_AP024708
• Coordinates: 4257317..4258375 (-)
• Length: 352 a.a.
• NCBI ID: WP_005034346.1
• Uniprot ID: N9CZM5
• Organism: Acinetobacter sp. Tol 5
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4252317..4263375

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TOL5_RS22555 (TOL5_38960)	aroK	4252629..4253171 (-)	543	WP_004825383.1	shikimate kinase AroK	-
TOL5_RS19730 (TOL5_38970)	pilQ	4253208..4255379 (-)	2172	WP_121774349.1	type IV pilus secretin PilQ	Machinery gene
TOL5_RS19735 (TOL5_38980)	comL	4255400..4255930 (-)	531	WP_005034344.1	pilus assembly protein PilP	Machinery gene
TOL5_RS19740 (TOL5_38990)	comO	4255927..4256679 (-)	753	WP_121774348.1	type 4a pilus biogenesis protein PilO	Machinery gene
TOL5_RS19745 (TOL5_39000)	pilN	4256676..4257317 (-)	642	WP_004825390.1	PilN domain-containing protein	Machinery gene
TOL5_RS19750 (TOL5_39010)	comM	4257317..4258375 (-)	1059	WP_005034346.1	pilus assembly protein PilM	Machinery gene
TOL5_RS19755 (TOL5_39020)	ponA	4258539..4261079 (+)	2541	WP_042089092.1	penicillin-binding protein PBP1a	-
TOL5_RS19760 (TOL5_39030)	-	4261139..4261942 (-)	804	WP_221260585.1	putative RNA methyltransferase	-
TOL5_RS19765 (TOL5_39040)	mraY	4262016..4263134 (-)	1119	WP_004825397.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39076.76 Da
• Isoelectric Point: 4.5448

>NTDB_id=87608 TOL5_RS19750 WP_005034346.1 4257317..4258375(-) (comM) [Acinetobacter sp. Tol 5]
MLRLYRKQNKGLVGVDISSTTVKILELSVKNGRYWVESYGLSPLIDGSVVEKNILNPEAVADALERAVNLANPQSQNVAV
AVPTSMVIHKIIEMDADMSDEEREVQIRMDAEQYIPFPLDEVSLDFEVLNDKLANPNRVNVLLVATRAENIESRVEVLEI
AGLSPKIADVESYAIERAFDVFSDTLPIGVNLVGILDIGHTMTTLSVMQKGKIIYTREQVFGGKQLTQDVQNRYGLSYEE
AGRAKKDRTLPDDFETEVLMPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTVANPFL
QMGFSPQIDLRKIENDAPSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=87608 TOL5_RS19750 WP_005034346.1 4257317..4258375(-) (comM) [Acinetobacter sp. Tol 5]
GTGCTTAGACTATATCGTAAGCAAAATAAGGGGTTGGTAGGAGTAGATATTAGTTCTACTACTGTAAAAATTTTAGAGCT
CTCTGTTAAGAACGGTCGTTACTGGGTTGAAAGTTATGGATTAAGTCCGCTGATTGATGGGAGTGTGGTTGAAAAAAACA
TTCTCAATCCAGAAGCAGTTGCAGATGCATTAGAGCGAGCAGTCAATCTTGCTAACCCTCAATCGCAAAATGTAGCTGTT
GCTGTACCTACTTCTATGGTGATTCATAAAATCATAGAAATGGATGCAGATATGTCCGATGAGGAAAGAGAAGTTCAGAT
TCGAATGGATGCTGAACAATATATTCCTTTTCCTTTGGATGAAGTGAGCTTAGATTTTGAAGTATTGAATGATAAGTTAG
CCAATCCGAATCGAGTGAATGTACTTTTGGTGGCGACACGTGCTGAAAATATTGAGTCTCGTGTTGAAGTTCTGGAAATT
GCAGGCTTATCTCCTAAAATTGCAGATGTAGAAAGCTATGCCATAGAACGTGCATTCGATGTCTTTTCAGATACTTTACC
TATCGGGGTTAATCTTGTTGGGATCTTAGATATTGGTCACACCATGACCACATTGTCTGTGATGCAAAAAGGTAAGATTA
TTTACACGCGTGAGCAGGTGTTTGGGGGCAAACAACTGACACAAGATGTGCAAAATCGTTATGGTTTATCTTATGAGGAA
GCCGGTCGTGCCAAGAAAGACCGCACCTTACCCGATGATTTTGAAACTGAAGTGTTAATGCCGTTTTTAGAAGCTGTGGT
TCAGCAAGCAGCGCGTTCATTACAATTCTTCTTCTCCTCCTCACAATTTAATGAGATTGATCATATTTTGCTGGCAGGTG
GAAATGCAAATATCCCAGGTTTGGCAAAATTATTACAACAAAAATTAGGCTATCGAGTCACTGTTGCAAATCCATTTTTA
CAAATGGGTTTTTCACCCCAAATTGACTTAAGAAAAATAGAAAATGATGCACCATCACTCATGGTTGCATGTGGCTTAGC
GTTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9CZM5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	84.659	100	0.847
pilM	Acinetobacter baumannii D1279779	84.375	100	0.844
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	43.38	100	0.437