Detailed information
Bioinformatically predicted
Overview
| Name | comL | Type | Machinery gene |
| Locus tag | TOL5_RS19735 | Genome accession | NZ_AP024708 |
| Coordinates | 4255400..4255930 (-) | Length | 176 a.a. |
| NCBI ID | WP_005034344.1 | Uniprot ID | A0A0A8TMR9 |
| Organism | Acinetobacter sp. Tol 5 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 4250400..4260930
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TOL5_RS19720 (TOL5_38940) | - | 4250625..4251494 (-) | 870 | WP_121774350.1 | hypothetical protein | - |
| TOL5_RS19725 (TOL5_38950) | aroB | 4251513..4252592 (-) | 1080 | WP_004825381.1 | 3-dehydroquinate synthase | - |
| TOL5_RS22555 (TOL5_38960) | aroK | 4252629..4253171 (-) | 543 | WP_004825383.1 | shikimate kinase AroK | - |
| TOL5_RS19730 (TOL5_38970) | pilQ | 4253208..4255379 (-) | 2172 | WP_121774349.1 | type IV pilus secretin PilQ | Machinery gene |
| TOL5_RS19735 (TOL5_38980) | comL | 4255400..4255930 (-) | 531 | WP_005034344.1 | pilus assembly protein PilP | Machinery gene |
| TOL5_RS19740 (TOL5_38990) | comO | 4255927..4256679 (-) | 753 | WP_121774348.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| TOL5_RS19745 (TOL5_39000) | pilN | 4256676..4257317 (-) | 642 | WP_004825390.1 | PilN domain-containing protein | Machinery gene |
| TOL5_RS19750 (TOL5_39010) | comM | 4257317..4258375 (-) | 1059 | WP_005034346.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 19462.49 Da Isoelectric Point: 7.8147
>NTDB_id=87605 TOL5_RS19735 WP_005034344.1 4255400..4255930(-) (comL) [Acinetobacter sp. Tol 5]
MKKHNKIICGISFTLLLVGCDSRIDAVNQEMANIRSQTPLPIEPAPVFNPVPSFNYSAQQLRSPFLPSSLANELKVMSGK
RVYPNFSRQPQPLESYPLESLTLKGSMKGNAGQTVGLIQTPDGEIERVQLGNYMGMNQGRIIEITPTRIDLLEIVPDGRD
GYIERPRSLVLIGPVD
MKKHNKIICGISFTLLLVGCDSRIDAVNQEMANIRSQTPLPIEPAPVFNPVPSFNYSAQQLRSPFLPSSLANELKVMSGK
RVYPNFSRQPQPLESYPLESLTLKGSMKGNAGQTVGLIQTPDGEIERVQLGNYMGMNQGRIIEITPTRIDLLEIVPDGRD
GYIERPRSLVLIGPVD
Nucleotide
Download Length: 531 bp
>NTDB_id=87605 TOL5_RS19735 WP_005034344.1 4255400..4255930(-) (comL) [Acinetobacter sp. Tol 5]
ATGAAAAAACACAATAAAATAATCTGTGGAATCTCATTCACTTTGTTGTTGGTTGGTTGTGACTCTAGGATTGATGCCGT
CAATCAGGAAATGGCAAATATTCGTAGTCAAACACCTTTGCCGATTGAACCAGCACCTGTATTTAATCCTGTGCCAAGTT
TTAATTATTCTGCACAACAATTGCGTAGTCCATTCTTACCAAGTTCGTTGGCAAATGAATTAAAGGTGATGTCAGGAAAA
CGAGTGTATCCGAATTTCTCTAGACAACCGCAGCCACTTGAAAGTTATCCTTTAGAGTCGTTAACACTGAAAGGAAGCAT
GAAGGGCAATGCAGGACAAACGGTAGGCTTAATCCAAACACCAGATGGTGAAATTGAACGTGTTCAACTGGGCAATTACA
TGGGGATGAATCAGGGTCGAATTATTGAAATTACACCGACCCGTATTGATTTATTGGAAATTGTTCCAGATGGTCGAGAC
GGTTATATCGAAAGACCACGCAGTCTAGTTCTAATTGGTCCAGTGGATTAA
ATGAAAAAACACAATAAAATAATCTGTGGAATCTCATTCACTTTGTTGTTGGTTGGTTGTGACTCTAGGATTGATGCCGT
CAATCAGGAAATGGCAAATATTCGTAGTCAAACACCTTTGCCGATTGAACCAGCACCTGTATTTAATCCTGTGCCAAGTT
TTAATTATTCTGCACAACAATTGCGTAGTCCATTCTTACCAAGTTCGTTGGCAAATGAATTAAAGGTGATGTCAGGAAAA
CGAGTGTATCCGAATTTCTCTAGACAACCGCAGCCACTTGAAAGTTATCCTTTAGAGTCGTTAACACTGAAAGGAAGCAT
GAAGGGCAATGCAGGACAAACGGTAGGCTTAATCCAAACACCAGATGGTGAAATTGAACGTGTTCAACTGGGCAATTACA
TGGGGATGAATCAGGGTCGAATTATTGAAATTACACCGACCCGTATTGATTTATTGGAAATTGTTCCAGATGGTCGAGAC
GGTTATATCGAAAGACCACGCAGTCTAGTTCTAATTGGTCCAGTGGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comL | Acinetobacter baylyi ADP1 |
74.269 |
97.159 |
0.722 |
| pilP | Acinetobacter baumannii D1279779 |
72.832 |
98.295 |
0.716 |