Detailed information NTG0875287

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: WJM95_RS03440
• Genome accession: NZ_CP149798
• Coordinates: 771650..772285 (+)
• Length: 211 a.a.
• NCBI ID: WP_339127966.1
• Uniprot ID: -
• Organism: Streptomyces sp. f51
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 766650..777285

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WJM95_RS03410 (WJM95_03410)	ureG	766654..767331 (-)	678	WP_339127961.1	urease accessory protein UreG	-
WJM95_RS03415 (WJM95_03415)	-	767851..768525 (-)	675	WP_339127962.1	urease accessory UreF family protein	-
WJM95_RS03420 (WJM95_03420)	-	768525..770246 (-)	1722	WP_339127963.1	urease subunit alpha	-
WJM95_RS03425 (WJM95_03425)	-	770239..770550 (-)	312	WP_339127964.1	urease subunit beta	-
WJM95_RS03430 (WJM95_03430)	-	770565..770867 (-)	303	WP_103550668.1	urease subunit gamma	-
WJM95_RS03435 (WJM95_03435)	-	771185..771463 (-)	279	WP_339127965.1	type II toxin-antitoxin system Phd/YefM family antitoxin	-
WJM95_RS03440 (WJM95_03440)	clpP	771650..772285 (+)	636	WP_339127966.1	ATP-dependent Clp protease proteolytic subunit	Regulator
WJM95_RS03445 (WJM95_03445)	-	772293..772598 (+)	306	WP_037616621.1	hypothetical protein	-
WJM95_RS03450 (WJM95_03450)	-	773135..773608 (+)	474	WP_339127967.1	C40 family peptidase	-
WJM95_RS03455 (WJM95_03455)	-	774044..774502 (-)	459	WP_339127968.1	ATP-binding protein	-
WJM95_RS03460 (WJM95_03460)	-	774715..775572 (+)	858	WP_339127969.1	helix-turn-helix transcriptional regulator	-
WJM95_RS03465 (WJM95_03465)	-	775584..775808 (+)	225	WP_339127970.1	DUF397 domain-containing protein	-
WJM95_RS03470 (WJM95_03470)	-	775932..777056 (-)	1125	WP_339127971.1	8-amino-7-oxononanoate synthase	-

Sequence

Protein

• Length: 211 a.a.
• Molecular weight: 22743.87 Da
• Isoelectric Point: 6.1112

>NTDB_id=875287 WJM95_RS03440 WP_339127966.1 771650..772285(+) (clpP) [Streptomyces sp. f51]
MDSPSARHVLPEFTERTSTGMRTLDPYAKLLAERIVFLGTPIDATAANDVTAQFMYLEHQAPERDISLYINSPGGSFGAM
TAIYDTMRFVTCDVETICLGRAESAAAVLLAAGTPGKRLSLPGARVVLRQPSITEPVQGQTSDVAIRAAELVRTRGILEE
MLAGHTGQSPERVAADIERDRILDATAARDYGLIDRIVPGRRSAHPTPGAR

Nucleotide

• Length: 636 bp

>NTDB_id=875287 WJM95_RS03440 WP_339127966.1 771650..772285(+) (clpP) [Streptomyces sp. f51]
ATGGACAGCCCGTCCGCCCGCCATGTCCTGCCCGAGTTCACCGAACGCACGAGCACGGGAATGCGGACCCTGGATCCGTA
CGCGAAGCTGCTCGCCGAGCGGATCGTGTTCCTCGGAACACCGATCGACGCGACCGCGGCGAACGACGTGACGGCGCAGT
TCATGTACCTCGAACACCAGGCGCCCGAGCGGGACATCTCGCTGTACATCAACTCCCCCGGCGGCTCCTTCGGCGCGATG
ACCGCGATCTACGACACGATGCGGTTCGTGACCTGCGACGTCGAGACGATCTGCCTCGGCCGGGCGGAGTCGGCCGCGGC
GGTGCTGCTGGCCGCAGGGACTCCGGGCAAGCGGCTCTCCCTGCCGGGGGCGCGCGTCGTCCTGCGCCAGCCGTCGATCA
CGGAGCCGGTCCAGGGGCAGACCAGCGATGTGGCCATCCGGGCCGCGGAATTGGTCCGCACCCGCGGGATCCTGGAGGAG
ATGCTCGCGGGCCACACGGGCCAGAGCCCGGAGCGCGTCGCGGCGGACATCGAGCGCGACAGGATCCTCGACGCCACGGC
GGCGCGGGACTACGGACTGATCGACCGGATCGTCCCGGGCCGCAGGTCCGCGCACCCGACGCCCGGCGCGAGGTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (20-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	44.503	90.521	0.403
clpP	Streptococcus pneumoniae TIGR4	42.487	91.469	0.389
clpP	Streptococcus pneumoniae Rx1	42.487	91.469	0.389
clpP	Streptococcus pneumoniae D39	42.487	91.469	0.389
clpP	Streptococcus pneumoniae R6	42.487	91.469	0.389
clpP	Streptococcus thermophilus LMG 18311	41.237	91.943	0.379
clpP	Streptococcus thermophilus LMD-9	41.237	91.943	0.379
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	41.799	89.573	0.374
clpP	Streptococcus mutans UA159	39.303	95.261	0.374
clpP	Streptococcus pyogenes MGAS315	40.415	91.469	0.37
clpP	Streptococcus pyogenes JRS4	40.415	91.469	0.37
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	39.691	91.943	0.365
clpP	Lactococcus lactis subsp. cremoris KW2	39.691	91.943	0.365