Detailed information NTG0874588

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: RDV58_RS03450
• Genome accession: NZ_CP133475
• Coordinates: 663008..663622 (+)
• Length: 204 a.a.
• NCBI ID: WP_255262943.1
• Uniprot ID: -
• Organism: Streptococcus mutans strain LMG 14558
• Function: degradation of ComX; require for competence development (at the early growth phase); repress competence development (at the mid-logarithmic growth phase) (predicted from homology) Competence regulation

Genomic Context

Location: 658008..668622

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RDV58_RS03435 (RDV58_03435)	-	659485..660579 (+)	1095	WP_002268067.1	cystathionine gamma-synthase	-
RDV58_RS03440 (RDV58_03440)	-	660594..661757 (+)	1164	WP_002280182.1	MalY/PatB family protein	-
RDV58_RS03445 (RDV58_03445)	upp	662070..662699 (+)	630	WP_002262598.1	uracil phosphoribosyltransferase	-
RDV58_RS03450 (RDV58_03450)	clpP	663008..663622 (+)	615	WP_255262943.1	ATP-dependent Clp protease proteolytic subunit ClpP	Regulator
RDV58_RS03455 (RDV58_03455)	-	663737..664177 (+)	441	WP_002275751.1	YlbF family regulator	-
RDV58_RS03460 (RDV58_03460)	-	664184..664432 (+)	249	WP_002262674.1	YlbG family protein	-
RDV58_RS03465 (RDV58_03465)	-	664535..665707 (+)	1173	WP_002280201.1	ABC transporter substrate-binding protein	-
RDV58_RS03470 (RDV58_03470)	-	665791..666660 (+)	870	WP_002262676.1	branched-chain amino acid ABC transporter permease	-
RDV58_RS03475 (RDV58_03475)	-	666664..667620 (+)	957	WP_002262677.1	branched-chain amino acid ABC transporter permease	-
RDV58_RS03480 (RDV58_03480)	-	667620..668384 (+)	765	WP_002262678.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22665.10 Da
• Isoelectric Point: 5.3673

>NTDB_id=874588 RDV58_RS03450 WP_255262943.1 663008..663622(+) (clpP) [Streptococcus mutans strain LMG 14558]
MELKEKYSMIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYLYINSPGGSVSAG
LAIVDTMNFIKSDVQTIVMGIAASMGTIIASSGAKGKRFMLPNAEYLIHQPMGGTGGGTQQSDMAIAAEQLLKTRKKLEK
ILSDNSGKTVKQIHKDAERDYWMDAKETLKYGFIDEIMENNELK

Nucleotide

• Length: 615 bp

>NTDB_id=874588 RDV58_RS03450 WP_255262943.1 663008..663622(+) (clpP) [Streptococcus mutans strain LMG 14558]
ATTGAATTAAAGGAGAAATACAGTATGATTCCTGTAGTTATTGAACAAACGAGCCGTGGTGAACGCTCTTATGATATTTA
TTCACGTCTATTAAAAGATCGTATTATTATGTTAACTGGTCCTGTTGAAGACAATATGGCAAATTCCATTATTGCTCAGT
TACTGTTTCTTGATGCACAAGATAATACCAAAGACATTTATCTTTATATTAACTCACCGGGTGGTTCTGTTTCAGCTGGT
CTTGCTATTGTTGATACGATGAACTTTATTAAGTCTGATGTTCAAACGATTGTTATGGGTATTGCTGCTTCCATGGGAAC
AATCATCGCTTCTAGCGGTGCCAAAGGAAAACGTTTTATGTTACCAAATGCAGAATATCTTATCCATCAGCCAATGGGCG
GTACAGGCGGTGGCACACAGCAGTCTGATATGGCTATTGCTGCCGAACAATTGCTTAAAACACGCAAAAAATTAGAAAAG
ATTCTATCGGATAATTCTGGAAAAACAGTAAAACAAATTCATAAGGATGCTGAACGTGATTATTGGATGGATGCTAAGGA
AACATTAAAGTATGGCTTCATCGATGAAATCATGGAAAATAATGAATTAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (19-200)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus mutans UA159	99.51	100	0.995
clpP	Streptococcus pyogenes JRS4	90.306	96.078	0.868
clpP	Streptococcus pyogenes MGAS315	90.306	96.078	0.868
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	87.755	96.078	0.843
clpP	Streptococcus thermophilus LMD-9	87.245	96.078	0.838
clpP	Lactococcus lactis subsp. cremoris KW2	87.245	96.078	0.838
clpP	Streptococcus thermophilus LMG 18311	87.245	96.078	0.838
clpP	Streptococcus pneumoniae Rx1	86.154	95.588	0.824
clpP	Streptococcus pneumoniae D39	86.154	95.588	0.824
clpP	Streptococcus pneumoniae R6	86.154	95.588	0.824
clpP	Streptococcus pneumoniae TIGR4	86.154	95.588	0.824
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.513	94.608	0.544
clpP	Bacillus subtilis subsp. subtilis str. 168	55.838	96.569	0.539