Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   Q7621_RS04255 Genome accession   NZ_CP131712
Coordinates   868521..869171 (+) Length   216 a.a.
NCBI ID   WP_000387331.1    Uniprot ID   A0A0E7VQD3
Organism   Streptococcus pneumoniae strain 2008C09-280     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 863521..874171
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7621_RS04220 (Q7621_04215) - 864004..864219 (+) 216 WP_001232085.1 YozE family protein -
  Q7621_RS04225 (Q7621_04220) - 864305..865273 (+) 969 WP_000658183.1 PhoH family protein -
  Q7621_RS04230 (Q7621_04225) - 865251..865430 (-) 180 WP_001813350.1 hypothetical protein -
  Q7621_RS04235 (Q7621_04230) - 865466..865967 (+) 502 Protein_834 GNAT family N-acetyltransferase -
  Q7621_RS04240 (Q7621_04235) - 865970..866296 (+) 327 Protein_835 TfoX/Sxy family protein -
  Q7621_RS04245 (Q7621_04240) ald 866597..867707 (-) 1111 Protein_836 alanine dehydrogenase -
  Q7621_RS04250 (Q7621_04245) - 867884..868453 (+) 570 WP_000443744.1 GNAT family N-acetyltransferase -
  Q7621_RS04255 (Q7621_04250) comEA/celA/cilE 868521..869171 (+) 651 WP_000387331.1 ComEA family DNA-binding protein Machinery gene
  Q7621_RS04260 (Q7621_04255) comEC/celB 869155..871395 (+) 2241 WP_341966707.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  Q7621_RS04265 (Q7621_04260) - 871537..871761 (+) 225 WP_001813351.1 hypothetical protein -
  Q7621_RS04270 (Q7621_04265) - 871793..872380 (+) 588 WP_000945253.1 ABC transporter ATP-binding protein -
  Q7621_RS04275 (Q7621_04270) - 872384..873565 (+) 1182 WP_000655954.1 hypothetical protein -

Sequence


Protein


Download         Length: 216 a.a.        Molecular weight: 23203.57 Da        Isoelectric Point: 5.5171

>NTDB_id=864262 Q7621_RS04255 WP_000387331.1 868521..869171(+) (comEA/celA/cilE) [Streptococcus pneumoniae strain 2008C09-280]
MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKPAPQTPVKETNLQAEVAAVSKDLVSEKEVNKEEKEEPLEQDLITVDVKG
AVKSPGIYDLPVGSRVNDAVQKAGGLTEQADSKSLNLAQKVSDEALVYVPTKGEEAVSQQTGSGTASSISKEKKVNLNKA
SLEELKQVKGLGGKRAQDIIDHREANGKFKSVDELKKVSGIGGKTIEKLKDYVTVD

Nucleotide


Download         Length: 651 bp        

>NTDB_id=864262 Q7621_RS04255 WP_000387331.1 868521..869171(+) (comEA/celA/cilE) [Streptococcus pneumoniae strain 2008C09-280]
ATGGAAGCAATTATCGAGAAAATCAAAGAGTATAAAATCATCGTCATCTGTACTGGTCTGGGCTTGCTTGTAGGCGGATT
TTTCCTGCTAAAGCCAGCTCCACAAACACCTGTAAAGGAAACGAATTTGCAGGCTGAAGTTGCAGCTGTTTCCAAGGATT
TGGTATCCGAAAAGGAAGTGAACAAGGAAGAGAAGGAAGAACCCCTTGAACAAGATCTAATCACAGTAGATGTCAAAGGT
GCTGTCAAATCGCCAGGGATTTATGACTTGCCTGTAGGTAGTCGAGTCAATGATGCTGTTCAGAAGGCTGGTGGCTTGAC
AGAGCAAGCAGACAGCAAGTCGCTCAATCTAGCTCAGAAAGTTAGTGATGAGGCTCTGGTTTACGTTCCTACTAAGGGAG
AAGAAGCAGTTAGTCAACAGACTGGTTCGGGGACAGCTTCTTCAATAAGCAAGGAAAAGAAGGTCAATCTCAACAAGGCC
AGTCTGGAAGAACTCAAGCAGGTCAAGGGACTGGGAGGAAAACGAGCTCAGGACATTATCGACCATCGTGAGGCAAATGG
CAAGTTCAAGTCAGTAGACGAGCTCAAGAAGGTCTCTGGCATTGGTGGCAAAACAATAGAAAAGCTTAAAGACTATGTTA
CAGTGGATTAA

Domains


Predicted by InterproScan.

(76-126)

(151-214)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0E7VQD3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus pneumoniae Rx1

99.537

100

0.995

  comEA/celA/cilE Streptococcus pneumoniae D39

99.537

100

0.995

  comEA/celA/cilE Streptococcus pneumoniae R6

99.537

100

0.995

  comEA/celA/cilE Streptococcus pneumoniae TIGR4

97.685

100

0.977

  comEA/celA/cilE Streptococcus mitis NCTC 12261

96.296

100

0.963

  comEA/celA/cilE Streptococcus mitis SK321

90.741

100

0.907

  comEA Lactococcus lactis subsp. cremoris KW2

43.612

100

0.458

  comEA Bacillus subtilis subsp. subtilis str. 168

41.579

87.963

0.366

  comEA Latilactobacillus sakei subsp. sakei 23K

33.476

100

0.361