Detailed information NTG0863994

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: Q7625_RS10040
• Genome accession: NZ_CP131708
• Coordinates: 1960600..1961004 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588030.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 2016C10-332
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1955600..1966004

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7625_RS10000 (Q7625_09985)	rnpA	1956015..1956386 (-)	372	WP_000739246.1	ribonuclease P protein component	-
Q7625_RS10005 (Q7625_09990)	-	1956403..1956534 (-)	132	WP_000768904.1	hypothetical protein	-
Q7625_RS10010 (Q7625_09995)	-	1956535..1957725 (-)	1191	WP_000167766.1	acetate kinase	-
Q7625_RS10015 (Q7625_10000)	comYH	1957776..1958729 (-)	954	WP_000345133.1	class I SAM-dependent methyltransferase	Machinery gene
Q7625_RS10020 (Q7625_10005)	-	1958790..1959384 (-)	595	Protein_1949	methyltransferase domain-containing protein	-
Q7625_RS10025 (Q7625_10010)	comGG/cglG	1959487..1959933 (-)	447	WP_001811371.1	competence type IV pilus minor pilin ComGG	Machinery gene
Q7625_RS10030 (Q7625_10015)	comGF/cglF	1959911..1960372 (-)	462	WP_000250539.1	competence type IV pilus minor pilin ComGF	Machinery gene
Q7625_RS10035 (Q7625_10020)	comGE/cglE	1960335..1960637 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
Q7625_RS10040 (Q7625_10025)	comGD/cglD	1960600..1961004 (-)	405	WP_000588030.1	competence type IV pilus minor pilin ComGD	Machinery gene
Q7625_RS10045 (Q7625_10030)	comGC/cglC	1960997..1961323 (-)	327	WP_000738625.1	competence type IV pilus major pilin ComGC	Machinery gene
Q7625_RS10050 (Q7625_10035)	comGB/cglB	1961325..1962341 (-)	1017	WP_078134418.1	competence type IV pilus assembly protein ComGB	Machinery gene
Q7625_RS10055 (Q7625_10040)	comGA/cglA/cilD	1962289..1963230 (-)	942	WP_000249573.1	competence type IV pilus ATPase ComGA	Machinery gene
Q7625_RS10060 (Q7625_10045)	-	1963306..1963671 (-)	366	WP_000286415.1	DUF1033 family protein	-
Q7625_RS10065 (Q7625_10050)	-	1963822..1964880 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14668.85 Da
• Isoelectric Point: 10.2164

>NTDB_id=863994 Q7625_RS10040 WP_000588030.1 1960600..1961004(-) (comGD/cglD) [Streptococcus pneumoniae strain 2016C10-332]
MIKAFTMLESLLVLGLVSILALGLSSSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=863994 Q7625_RS10040 WP_000588030.1 1960600..1961004(-) (comGD/cglD) [Streptococcus pneumoniae strain 2016C10-332]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTATCCAGCTC
TGTCCAGTCCACTTTTGCAGCAGTAGAGGAGCAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTAAATTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	48.438	95.522	0.463
comYD	Streptococcus mutans UA159	48.438	95.522	0.463