Detailed information NTG0863437

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: WAB15_RS36850
• Genome accession: NZ_CP147982
• Coordinates: 8305888..8306523 (-)
• Length: 211 a.a.
• NCBI ID: WP_399151152.1
• Uniprot ID: A0ABZ2QXL8
• Organism: Streptomyces sp. BP-8
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 8300888..8311523

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WAB15_RS36820 (WAB15_36790)	-	8301412..8301840 (+)	429	WP_399151158.1	ATP-binding protein	-
WAB15_RS36825 (WAB15_36795)	-	8301943..8302536 (-)	594	WP_407288962.1	NAD(P)H-dependent oxidoreductase	-
WAB15_RS36830 (WAB15_36800)	-	8302716..8303633 (-)	918	WP_407288963.1	LysR family transcriptional regulator	-
WAB15_RS36835 (WAB15_36805)	-	8303705..8304385 (+)	681	WP_407288964.1	LysE family translocator	-
WAB15_RS36840 (WAB15_36810)	-	8304620..8305093 (-)	474	WP_399151154.1	C40 family peptidase	-
WAB15_RS36845 (WAB15_36815)	-	8305577..8305882 (-)	306	WP_399151153.1	hypothetical protein	-
WAB15_RS36850 (WAB15_36820)	clpP	8305888..8306523 (-)	636	WP_399151152.1	ATP-dependent Clp protease proteolytic subunit	Regulator
WAB15_RS36855 (WAB15_36825)	-	8306582..8306896 (+)	315	WP_393500857.1	type II toxin-antitoxin system Phd/YefM family antitoxin	-
WAB15_RS36860 (WAB15_36830)	-	8306957..8307901 (-)	945	WP_399148083.1	M28 family metallopeptidase	-
WAB15_RS36865 (WAB15_36835)	-	8308426..8308728 (+)	303	WP_360957481.1	urease subunit gamma	-
WAB15_RS36870 (WAB15_36840)	-	8308746..8309057 (+)	312	WP_399148084.1	urease subunit beta	-
WAB15_RS36875 (WAB15_36845)	-	8309050..8310771 (+)	1722	WP_407288965.1	urease subunit alpha	-
WAB15_RS36880 (WAB15_36850)	-	8310827..8311501 (+)	675	WP_407288966.1	urease accessory protein UreF	-

Sequence

Protein

• Length: 211 a.a.
• Molecular weight: 22935.26 Da
• Isoelectric Point: 6.0016

>NTDB_id=863437 WAB15_RS36850 WP_399151152.1 8305888..8306523(-) (clpP) [Streptomyces sp. BP-8]
MLRPTARYVLPEFTERTSQGTRTMDPYSKLLSERIIFLGTPVDDASANDVMAQLIHLEHAAPEQDISLYINSPGGSLTAM
TAIYDTMRFVSCDVATVCLGQAASAAAVLLAAGAPGKRLALPGARVLIHQPSLHEPIQGQATDLQIQAEEMLRSRDMLVE
MLARHTGQTPERIAADIERDKIFDAPAAQAYGLIDGLTRNRKQSALQPVTR

Nucleotide

• Length: 636 bp

>NTDB_id=863437 WAB15_RS36850 WP_399151152.1 8305888..8306523(-) (clpP) [Streptomyces sp. BP-8]
ATGCTGCGACCTACGGCTCGCTATGTCCTGCCGGAGTTCACCGAGCGCACCTCGCAGGGGACGCGCACCATGGACCCGTA
CTCCAAGCTGCTCAGCGAGCGCATCATCTTCTTGGGCACCCCGGTGGACGACGCCTCCGCCAACGACGTCATGGCGCAGC
TCATCCACCTCGAACACGCCGCGCCGGAGCAGGACATCTCGCTCTACATCAACTCCCCCGGCGGCTCCCTCACCGCGATG
ACCGCCATCTACGACACGATGCGCTTCGTGTCGTGCGACGTGGCGACGGTGTGCCTGGGGCAGGCCGCGTCCGCCGCCGC
GGTACTGCTGGCCGCAGGCGCCCCCGGCAAGCGGCTGGCGCTGCCCGGCGCCCGGGTACTGATCCACCAGCCCTCGCTCC
ACGAACCCATCCAGGGACAGGCCACCGACCTGCAGATCCAGGCGGAGGAGATGCTGCGCAGCCGCGACATGCTGGTGGAG
ATGCTGGCGCGGCACACCGGGCAGACCCCCGAGCGGATCGCCGCCGACATCGAGCGCGACAAGATCTTCGACGCGCCCGC
CGCCCAGGCGTACGGCCTGATCGACGGGCTCACCCGCAACCGCAAGCAGTCGGCCCTCCAGCCCGTCACGCGGTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (19-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	50.794	89.573	0.455
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.462	88.152	0.436
clpP	Streptococcus pneumoniae Rx1	44.56	91.469	0.408
clpP	Streptococcus pneumoniae D39	44.56	91.469	0.408
clpP	Streptococcus pneumoniae R6	44.56	91.469	0.408
clpP	Streptococcus pneumoniae TIGR4	44.56	91.469	0.408
clpP	Streptococcus mutans UA159	43.814	91.943	0.403
clpP	Streptococcus pyogenes JRS4	43.814	91.943	0.403
clpP	Streptococcus pyogenes MGAS315	43.814	91.943	0.403
clpP	Lactococcus lactis subsp. cremoris KW2	42.784	91.943	0.393
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	42.784	91.943	0.393
clpP	Streptococcus thermophilus LMG 18311	41.753	91.943	0.384
clpP	Streptococcus thermophilus LMD-9	41.753	91.943	0.384