Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   Q7260_RS07135 Genome accession   NZ_CP131440
Coordinates   1349329..1349844 (-) Length   171 a.a.
NCBI ID   WP_002799196.1    Uniprot ID   Q0P8R6
Organism   Campylobacter jejuni strain S36     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1344329..1354844
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7260_RS07120 (Q7260_07120) - 1344425..1346248 (-) 1824 WP_305101507.1 motility associated factor glycosyltransferase family protein -
  Q7260_RS07125 (Q7260_07125) - 1346245..1348077 (-) 1833 WP_305101508.1 motility associated factor glycosyltransferase family protein -
  Q7260_RS07130 (Q7260_07130) - 1348087..1349329 (-) 1243 Protein_1387 DUF2920 family protein -
  Q7260_RS07135 (Q7260_07135) ctsG 1349329..1349844 (-) 516 WP_002799196.1 type II secretion system protein Machinery gene
  Q7260_RS07140 (Q7260_07140) tsaD 1349845..1350852 (-) 1008 WP_002886115.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  Q7260_RS07145 (Q7260_07145) - 1350849..1352243 (-) 1395 WP_002914004.1 M99 family carboxypeptidase catalytic domain-containing protein -
  Q7260_RS07150 (Q7260_07150) dxr 1352245..1353315 (-) 1071 WP_220522570.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  Q7260_RS07155 (Q7260_07155) cdsA 1353312..1354037 (-) 726 WP_057033757.1 phosphatidate cytidylyltransferase -
  Q7260_RS07160 (Q7260_07160) - 1354046..1354384 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18678.56 Da        Isoelectric Point: 6.4682

>NTDB_id=862404 Q7260_RS07135 WP_002799196.1 1349329..1349844(-) (ctsG) [Campylobacter jejuni strain S36]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=862404 Q7260_RS07135 WP_002799196.1 1349329..1349844(-) (ctsG) [Campylobacter jejuni strain S36]
ATGAAAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATCGTTATTTTGGGAATTTTAGCCGCTATTGCTTTGCCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGCAAGTCTTTAAACAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCTAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0P8R6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

94.152

100

0.942