Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   Q7260_RS07180 Genome accession   NZ_CP131440
Coordinates   1357402..1358370 (+) Length   322 a.a.
NCBI ID   WP_057033756.1    Uniprot ID   -
Organism   Campylobacter jejuni strain S36     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1352402..1363370
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7260_RS07155 (Q7260_07155) cdsA 1353312..1354037 (-) 726 WP_057033757.1 phosphatidate cytidylyltransferase -
  Q7260_RS07160 (Q7260_07160) - 1354046..1354384 (-) 339 WP_002852397.1 hypothetical protein -
  Q7260_RS07165 (Q7260_07165) - 1354386..1355693 (-) 1308 WP_002864240.1 NFACT family protein -
  Q7260_RS07170 (Q7260_07170) mobA 1355755..1356330 (+) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  Q7260_RS07175 (Q7260_07175) pldA 1356327..1357316 (+) 990 WP_032590534.1 phospholipase A -
  Q7260_RS07180 (Q7260_07180) ceuB 1357402..1358370 (+) 969 WP_057033756.1 ABC transporter permease Machinery gene
  Q7260_RS07185 (Q7260_07185) ceuC 1358363..1359301 (+) 939 WP_139863883.1 iron chelate uptake ABC transporter family permease subunit -
  Q7260_RS07190 (Q7260_07190) ceuD 1359298..1360053 (+) 756 WP_057033755.1 ABC transporter ATP-binding protein -
  Q7260_RS07195 (Q7260_07195) ceuB 1360066..1361058 (+) 993 WP_057033754.1 enterochelin ABC transporter substrate-binding protein CeuB -
  Q7260_RS07205 (Q7260_07205) - 1361284..1361838 (-) 555 WP_002884169.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35431.31 Da        Isoelectric Point: 9.6678

>NTDB_id=862405 Q7260_RS07180 WP_057033756.1 1357402..1358370(+) (ceuB) [Campylobacter jejuni strain S36]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQAIIASIFAFLGSFVFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKA
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=862405 Q7260_RS07180 WP_057033756.1 1357402..1358370(+) (ceuB) [Campylobacter jejuni strain S36]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTCACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACAGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTTACTCAAGCTATCATTGCTTCTATATTTGCATTTTTGGGTTCTTTTGTATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACTACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
ACTTTACATTTCTTTGCCACTTTTTATACTTGCTTATTTTTTAGCTCACAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGAATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTGCTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGCT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991