Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   Q7260_RS07495 Genome accession   NZ_CP131440
Coordinates   1420247..1421431 (-) Length   394 a.a.
NCBI ID   WP_002780434.1    Uniprot ID   A0A0U3A9V8
Organism   Campylobacter jejuni strain S36     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1415247..1426431
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7260_RS07470 (Q7260_07470) fliL 1416395..1416931 (+) 537 WP_002868488.1 flagellar basal body-associated protein FliL -
  Q7260_RS07475 (Q7260_07475) acpS 1416931..1417278 (+) 348 WP_002780441.1 holo-ACP synthase -
  Q7260_RS07480 (Q7260_07480) - 1417279..1417698 (-) 420 WP_002780440.1 hypothetical protein -
  Q7260_RS07485 (Q7260_07485) - 1417695..1419056 (-) 1362 WP_052804303.1 cytochrome P450 -
  Q7260_RS07490 (Q7260_07490) - 1419053..1420174 (-) 1122 WP_002901827.1 hypothetical protein -
  Q7260_RS07495 (Q7260_07495) kpsS 1420247..1421431 (-) 1185 WP_002780434.1 capsule polysaccharide modification protein KpsS Regulator
  Q7260_RS07500 (Q7260_07500) kpsC 1421428..1423497 (-) 2070 WP_052798178.1 capsular polysaccharide biosynthesis protein -
  Q7260_RS07505 (Q7260_07505) cysC 1423494..1424006 (-) 513 WP_002818256.1 cytidine diphosphoramidate kinase -
  Q7260_RS07510 (Q7260_07510) - 1423996..1424757 (-) 762 WP_002872736.1 CTP:phosphoglutamine cytidylyltransferase -
  Q7260_RS07515 (Q7260_07515) - 1424759..1425361 (-) 603 WP_052804305.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46824.57 Da        Isoelectric Point: 9.9369

>NTDB_id=862407 Q7260_RS07495 WP_002780434.1 1420247..1421431(-) (kpsS) [Campylobacter jejuni strain S36]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAIKMKKKQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=862407 Q7260_RS07495 WP_002780434.1 1420247..1421431(-) (kpsS) [Campylobacter jejuni strain S36]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAATAAAAATGAAAAAAAAACAAACCAAAGTTTTTAAACTCAATTTTAACGGTGGAGATTTTTTTTTCT
ATCCTAGTGGAACGAGGTGTAAGTGCGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAGCAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGTATTATCCATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAACACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTATGTAATTTTAAAA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0U3A9V8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

98.223

100

0.982