Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   Q6357_RS00950 Genome accession   NZ_CP130888
Coordinates   170615..171406 (-) Length   263 a.a.
NCBI ID   WP_304717389.1    Uniprot ID   -
Organism   Bacillus altitudinis strain 28M1-1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 165615..176406
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q6357_RS00925 (Q6357_00925) - 168211..169194 (-) 984 WP_008341983.1 glycosyltransferase family 2 protein -
  Q6357_RS00930 (Q6357_00930) - 169496..169768 (-) 273 WP_017366871.1 YfhJ family protein -
  Q6357_RS00935 (Q6357_00935) - 169885..170034 (+) 150 WP_003217849.1 small, acid-soluble spore protein K -
  Q6357_RS00940 (Q6357_00940) - 170060..170233 (+) 174 WP_003217811.1 YpzG family protein -
  Q6357_RS00945 (Q6357_00945) - 170297..170611 (-) 315 WP_025206966.1 YfhH family protein -
  Q6357_RS00950 (Q6357_00950) recX 170615..171406 (-) 792 WP_304717389.1 recombination regulator RecX Regulator
  Q6357_RS00955 (Q6357_00955) - 171502..172398 (+) 897 WP_304717391.1 TIGR01777 family oxidoreductase -
  Q6357_RS00960 (Q6357_00960) - 172451..172561 (+) 111 WP_017358836.1 YfhE family protein -
  Q6357_RS00965 (Q6357_00965) - 172623..172778 (+) 156 WP_008341997.1 YfhD family protein -
  Q6357_RS00970 (Q6357_00970) - 172814..173401 (-) 588 WP_024720283.1 nitroreductase -
  Q6357_RS00975 (Q6357_00975) - 173672..174928 (+) 1257 WP_008341668.1 transcriptional regulator -
  Q6357_RS00980 (Q6357_00980) - 174964..175431 (-) 468 WP_024720282.1 thiol-disulfide oxidoreductase DCC family protein -
  Q6357_RS00985 (Q6357_00985) - 175770..176318 (-) 549 WP_008341670.1 thioredoxin family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30629.05 Da        Isoelectric Point: 7.5049

>NTDB_id=861518 Q6357_RS00950 WP_304717389.1 170615..171406(-) (recX) [Bacillus altitudinis strain 28M1-1]
MPYITKISAQKNNTQRVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKDIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPNDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFDIIDKALQEAYDGQEEEKEEEALHYMLEKAKRKVGYDGSFEKKMK
VKQFLYRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=861518 Q6357_RS00950 WP_304717389.1 170615..171406(-) (recX) [Bacillus altitudinis strain 28M1-1]
ATGCCCTATATTACGAAAATCTCTGCTCAGAAAAACAATACACAACGCGTGAACATCTTTCTTGATGAAAAGTACGCTTT
TAGCGTTGATCTAGATGTGCTCGTCCAGCATGATTTGAAAAAGGGAAAAGAGCTGGATGAAGCCGATATCATAGAGATTC
AATTCGGTGATGCAGTAAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCGTATCGGATGAGATCAGTGAAAGAAGTC
ACCGATTATTTGACGAAAAAAGACATACCAGCACCTGCTATTAGTGAAATTATACACAAATTAAAACATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCGTATGTAAGCACCCACCGAAAAACGAATAGCAAAGGCCCGTCAGTGCTAAAAAAAG
AGTTAAAGCTGAAAGGCATAGACGATGACACCATCGAACAAGCACTATCGCAATATCCGAATGATTTGCAGCTAGAGGAA
GCAGTGAAACAAGTGCTAAAGCTGGTTAAGAAAGAGAAAAACCGGTCCGCAAAAGAAATTGAACAGCGTATCAAATTGCA
GCTTCAGCGAAAAGGATTTTCATTTGATATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTTCACTATATGCTTGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAGAAAAAAATGAAA
GTGAAGCAATTCCTTTACCGAAAAGGATTTGATCTTGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.118

100

0.631