Detailed information NTG0858647

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: Q2310_RS13890
• Genome accession: NZ_CP130491
• Coordinates: 2707344..2707925 (-)
• Length: 193 a.a.
• NCBI ID: WP_001092372.1
• Uniprot ID: A0A9W5R6W8
• Organism: Bacillus cereus strain T
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2702344..2712925

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q2310_RS13860 (Q2310_13825)	-	2702968..2703459 (-)	492	WP_025709464.1	HIT family protein	-
Q2310_RS13865 (Q2310_13830)	-	2703560..2703727 (-)	168	WP_000508397.1	hypothetical protein	-
Q2310_RS13870 (Q2310_13835)	-	2703945..2704181 (+)	237	WP_025709465.1	hypothetical protein	-
Q2310_RS13875 (Q2310_13840)	-	2704235..2705072 (-)	838	Protein_2658	ABC transporter permease	-
Q2310_RS13880 (Q2310_13845)	-	2705065..2706271 (-)	1207	Protein_2659	glycine betaine/L-proline ABC transporter ATP-binding protein	-
Q2310_RS13885 (Q2310_13850)	-	2706443..2707300 (+)	858	WP_001227615.1	glycine betaine ABC transporter substrate-binding protein	-
Q2310_RS13890 (Q2310_13855)	clpP	2707344..2707925 (-)	582	WP_001092372.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
Q2310_RS13895 (Q2310_13860)	-	2707947..2708633 (-)	687	WP_049108049.1	RNA polymerase subunit sigma-70	-
Q2310_RS13900 (Q2310_13865)	-	2708776..2709096 (+)	321	WP_061113039.1	2Fe-2S iron-sulfur cluster-binding protein	-
Q2310_RS13905 (Q2310_13870)	rpiA	2709101..2709763 (+)	663	WP_001049991.1	ribose 5-phosphate isomerase A	-
Q2310_RS13910 (Q2310_13875)	-	2709837..2709944 (+)	108	Protein_2665	GNAT family N-acetyltransferase	-
Q2310_RS13915 (Q2310_13880)	-	2710070..2711437 (-)	1368	WP_001065138.1	lytic polysaccharide monooxygenase	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21238.47 Da
• Isoelectric Point: 5.0776

>NTDB_id=858647 Q2310_RS13890 WP_001092372.1 2707344..2707925(-) (clpP) [Bacillus cereus strain T]
MNTIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDDVVTKK

Nucleotide

• Length: 582 bp

>NTDB_id=858647 Q2310_RS13890 WP_001092372.1 2707344..2707925(-) (clpP) [Bacillus cereus strain T]
ATGAATACAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGCATTATTATTATCGGCTCAGAAATTAACGATCAAGTAGCGAGTAGTGTCGTAGCGCAATTATTATTTTTAGAAGCAG
AAGATGCAGAAAAAGATATATATTTATACATCAATAGCCCAGGAGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTATGCATGGGCTTTGCGGCATCATTCGGTGCATTGTTATTATTATCAGG
AGCAAAAGGAAAACGGTTTGCGCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGCCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGCATATGGGATTGTAGA
TGACGTTGTTACGAAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	68.586	98.964	0.679
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.725	97.927	0.663
clpP	Streptococcus pyogenes JRS4	56.614	97.927	0.554
clpP	Streptococcus pyogenes MGAS315	56.614	97.927	0.554
clpP	Streptococcus pneumoniae R6	55.729	99.482	0.554
clpP	Streptococcus pneumoniae TIGR4	55.729	99.482	0.554
clpP	Streptococcus pneumoniae Rx1	55.729	99.482	0.554
clpP	Streptococcus thermophilus LMG 18311	55.729	99.482	0.554
clpP	Streptococcus thermophilus LMD-9	55.729	99.482	0.554
clpP	Streptococcus pneumoniae D39	55.729	99.482	0.554
clpP	Streptococcus mutans UA159	54.497	97.927	0.534
clpP	Lactococcus lactis subsp. cremoris KW2	52.91	97.927	0.518
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	50.794	97.927	0.497