Detailed information NTG0857643

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: QPK55_RS13840
• Genome accession: NZ_CP130284
• Coordinates: 2742327..2742908 (-)
• Length: 193 a.a.
• NCBI ID: WP_001092373.1
• Uniprot ID: -
• Organism: Bacillus cereus strain Z4
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2737327..2747908

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QPK55_RS13805 (QPK55_13805)	-	2737344..2738180 (-)	837	WP_302564438.1	PP2C family serine/threonine-protein phosphatase	-
QPK55_RS13810 (QPK55_13810)	-	2738164..2738477 (-)	314	Protein_2655	hypothetical protein	-
QPK55_RS13815 (QPK55_13815)	-	2738569..2738736 (-)	168	WP_000508403.1	hypothetical protein	-
QPK55_RS13820 (QPK55_13820)	-	2738954..2739166 (+)	213	WP_000553350.1	hypothetical protein	-
QPK55_RS13825 (QPK55_13825)	-	2739220..2740056 (-)	837	WP_001084759.1	ABC transporter permease	-
QPK55_RS13830 (QPK55_13830)	-	2740049..2741254 (-)	1206	WP_000370606.1	quaternary amine ABC transporter ATP-binding protein	-
QPK55_RS13835 (QPK55_13835)	-	2741426..2742283 (+)	858	WP_001227613.1	glycine betaine ABC transporter substrate-binding protein	-
QPK55_RS13840 (QPK55_13840)	clpP	2742327..2742908 (-)	582	WP_001092373.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
QPK55_RS13845 (QPK55_13845)	-	2742930..2743616 (-)	687	WP_000337511.1	RNA polymerase subunit sigma-70	-
QPK55_RS13850 (QPK55_13850)	-	2743759..2744079 (+)	321	WP_001125388.1	2Fe-2S iron-sulfur cluster-binding protein	-
QPK55_RS13855 (QPK55_13855)	rpiA	2744084..2744746 (+)	663	WP_001049991.1	ribose 5-phosphate isomerase A	-
QPK55_RS13860 (QPK55_13860)	-	2744858..2745292 (+)	435	WP_001190863.1	GNAT family N-acetyltransferase	-
QPK55_RS13865 (QPK55_13865)	-	2745420..2746787 (-)	1368	WP_001065159.1	lytic polysaccharide monooxygenase	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21266.53 Da
• Isoelectric Point: 5.0776

>NTDB_id=857643 QPK55_RS13840 WP_001092373.1 2742327..2742908(-) (clpP) [Bacillus cereus strain Z4]
MNTIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKVYGIVDDVVTKK

Nucleotide

• Length: 582 bp

>NTDB_id=857643 QPK55_RS13840 WP_001092373.1 2742327..2742908(-) (clpP) [Bacillus cereus strain Z4]
ATGAATACAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAGCGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGCATTATTATTATCGGCTCAGAAATTAACGATCAAGTAGCGAGTAGTGTCGTAGCGCAATTATTATTTTTAGAAGCAG
AAGATGCAGAAAAAGATATATATTTATACATCAATAGCCCAGGAGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTATGCATGGGCTTTGCGGCATCATTCGGTGCATTGTTATTATTATCAGG
AGCAAAAGGAAAACGGTTTGCGCTTCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACAGGCCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGTATATGGGATTGTAGA
TGATGTTGTTACGAAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	68.586	98.964	0.679
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.725	97.927	0.663
clpP	Streptococcus thermophilus LMD-9	55.729	99.482	0.554
clpP	Streptococcus pneumoniae Rx1	55.729	99.482	0.554
clpP	Streptococcus pneumoniae D39	55.729	99.482	0.554
clpP	Streptococcus pneumoniae TIGR4	55.729	99.482	0.554
clpP	Streptococcus pneumoniae R6	55.729	99.482	0.554
clpP	Streptococcus thermophilus LMG 18311	55.729	99.482	0.554
clpP	Streptococcus pyogenes JRS4	56.085	97.927	0.549
clpP	Streptococcus pyogenes MGAS315	56.085	97.927	0.549
clpP	Streptococcus mutans UA159	54.497	97.927	0.534
clpP	Lactococcus lactis subsp. cremoris KW2	52.91	97.927	0.518
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	50.794	97.927	0.497