Detailed information NTG0855135

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: V8690_RS14170
• Genome accession: NZ_CP146350
• Coordinates: 3054826..3055533 (-)
• Length: 235 a.a.
• NCBI ID: WP_338778934.1
• Uniprot ID: -
• Organism: Streptomyces sp. DG1A-41
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3049826..3060533

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V8690_RS14160 (V8690_14160)	-	3052348..3053298 (+)	951	WP_338778932.1	hypothetical protein	-
V8690_RS14165 (V8690_14165)	clpX	3053367..3054644 (-)	1278	Protein_2810	ATP-dependent Clp protease ATP-binding subunit ClpX	-
V8690_RS14170 (V8690_14170)	clpP	3054826..3055533 (-)	708	WP_338778934.1	ATP-dependent Clp protease proteolytic subunit	Regulator
V8690_RS14175 (V8690_14175)	-	3055644..3056249 (-)	606	WP_010041894.1	ATP-dependent Clp protease proteolytic subunit	-
V8690_RS14180 (V8690_14180)	tig	3056508..3057905 (-)	1398	WP_338778935.1	trigger factor	-
V8690_RS14195 (V8690_14195)	-	3058467..3058691 (-)	225	WP_338778937.1	hypothetical protein	-
V8690_RS14200 (V8690_14200)	-	3058634..3058882 (-)	249	WP_338778938.1	hypothetical protein	-
V8690_RS14205 (V8690_14205)	-	3058846..3059259 (-)	414	WP_338778940.1	PQQ-binding-like beta-propeller repeat protein	-
V8690_RS14210 (V8690_14210)	-	3059362..3059676 (-)	315	WP_338778942.1	hypothetical protein	-
V8690_RS14215 (V8690_14215)	-	3059631..3060434 (-)	804	WP_338785349.1	hypothetical protein	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 26138.64 Da
• Isoelectric Point: 4.6426

>NTDB_id=855135 V8690_RS14170 WP_338778934.1 3054826..3055533(-) (clpP) [Streptomyces sp. DG1A-41]
MNQFPGSGIYDRMQAVQDMSASQGRYTGPQAESRYVIPRFVERTSQGIREYDPYAKLFEERVIFLGVQIDDASANDVMAQ
LLCLESMDPDRDISVYINSPGGSFTALTAIYDTMQYVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPNARVLIHQPYS
ETGRGQVSDLEIAANEILRMRSQLEEMLAKHSTQTIEKIREDIERDKILTAEDALSYGLIDQVITTRKMDNSSLR

Nucleotide

• Length: 708 bp

>NTDB_id=855135 V8690_RS14170 WP_338778934.1 3054826..3055533(-) (clpP) [Streptomyces sp. DG1A-41]
GTGAACCAGTTCCCCGGCAGCGGGATCTACGACCGTATGCAGGCCGTGCAGGACATGAGCGCCTCGCAGGGCCGCTACAC
CGGCCCGCAGGCCGAGTCCCGCTATGTCATCCCGCGCTTCGTCGAGCGCACCTCCCAGGGCATCCGCGAGTACGACCCGT
ACGCGAAGCTCTTCGAGGAGCGCGTGATCTTCCTCGGCGTCCAGATCGACGACGCCTCCGCCAACGACGTCATGGCGCAG
CTGCTGTGCCTGGAGTCGATGGACCCCGACCGTGACATCTCGGTCTACATCAACAGCCCCGGTGGCTCCTTCACGGCGCT
CACGGCGATCTACGACACGATGCAGTACGTGAAGCCGGACATCCAGACGGTCTGCATGGGCCAGGCGGCCTCCGCCGCCG
CCGTCCTGCTGGCCGCCGGTACGCCGGGCAAGCGCATGGCCCTGCCGAACGCGCGCGTGCTGATCCACCAGCCGTACAGC
GAGACGGGCCGCGGCCAGGTGTCCGACCTGGAGATCGCCGCCAACGAGATCCTCCGGATGCGCTCGCAGCTGGAGGAGAT
GCTGGCCAAGCACTCCACGCAGACGATCGAGAAGATCCGCGAGGACATCGAGCGCGACAAGATCCTCACGGCCGAGGACG
CGCTGAGCTACGGCCTGATCGACCAGGTCATCACCACCCGGAAGATGGACAACTCGAGCCTGCGCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (46-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	51.579	80.851	0.417
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	51.064	80	0.409
clpP	Streptococcus mutans UA159	44.39	87.234	0.387
clpP	Streptococcus pyogenes JRS4	44.776	85.532	0.383
clpP	Streptococcus pyogenes MGAS315	44.776	85.532	0.383
clpP	Streptococcus thermophilus LMG 18311	45.128	82.979	0.374
clpP	Streptococcus thermophilus LMD-9	45.128	82.979	0.374
clpP	Lactococcus lactis subsp. cremoris KW2	43.564	85.957	0.374
clpP	Streptococcus pneumoniae Rx1	43.878	83.404	0.366
clpP	Streptococcus pneumoniae D39	43.878	83.404	0.366
clpP	Streptococcus pneumoniae R6	43.878	83.404	0.366
clpP	Streptococcus pneumoniae TIGR4	43.878	83.404	0.366
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	42.574	85.957	0.366