Detailed information NTG0854009

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: QYM01_RS08110
• Genome accession: NZ_CP129527
• Coordinates: 1708136..1708726 (-)
• Length: 196 a.a.
• NCBI ID: WP_012677455.1
• Uniprot ID: A0A922T644
• Organism: Streptococcus equi subsp. zooepidemicus strain BJ-1
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1703136..1713726

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYM01_RS08075 (QYM01_08075)	rsmI	1703479..1704345 (-)	867	WP_301899564.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
QYM01_RS08080 (QYM01_08080)	yabA	1704350..1704673 (-)	324	WP_012680029.1	DNA replication initiation control protein YabA	-
QYM01_RS08085 (QYM01_08085)	ricT	1704666..1705466 (-)	801	WP_111678451.1	regulatory iron-sulfur-containing complex subunit RicT	-
QYM01_RS08090 (QYM01_08090)	-	1705463..1706338 (-)	876	WP_111678453.1	DNA polymerase III subunit delta'	-
QYM01_RS08095 (QYM01_08095)	tmk	1706352..1706987 (-)	636	WP_301899571.1	dTMP kinase	-
QYM01_RS08100 (QYM01_08100)	-	1707302..1707586 (-)	285	WP_043053379.1	YlbG family protein	-
QYM01_RS08105 (QYM01_08105)	-	1707587..1708033 (-)	447	WP_301899574.1	YlbF family regulator	-
QYM01_RS08110 (QYM01_08110)	clpP	1708136..1708726 (-)	591	WP_012677455.1	ATP-dependent Clp protease proteolytic subunit	Regulator
QYM01_RS08115 (QYM01_08115)	upp	1708957..1709586 (-)	630	WP_012516202.1	uracil phosphoribosyltransferase	-
QYM01_RS08120 (QYM01_08120)	-	1709736..1711367 (-)	1632	WP_301899575.1	polysaccharide biosynthesis protein	-
QYM01_RS08125 (QYM01_08125)	-	1711453..1712898 (+)	1446	WP_301899576.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21561.76 Da
• Isoelectric Point: 5.0281

>NTDB_id=854009 QYM01_RS08110 WP_012677455.1 1708136..1708726(-) (clpP) [Streptococcus equi subsp. zooepidemicus strain BJ-1]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELA

Nucleotide

• Length: 591 bp

>NTDB_id=854009 QYM01_RS08110 WP_012677455.1 1708136..1708726(-) (clpP) [Streptococcus equi subsp. zooepidemicus strain BJ-1]
ATGATTCCTGTAGTTATTGAACAAACCAGTCGTGGAGAGCGTTCTTATGACATTTATTCACGTCTGTTAAAGGACCGTAT
TATCATGCTGACTGGTCCAGTAGAGGATAATATGGCAAACTCTGTTATTGCGCAGCTCTTGTTTTTAGATGCCCAAGACA
ACACAAAAGACATTTACCTCTATGTGAATACCCCAGGAGGCTCTGTATCAGCTGGTCTAGCTATTGTGGATACGATGAAC
TTTATTAAGGCAGATGTGCAAACCATTGTTATGGGTATGGCTGCCTCTATGGGAACCGTTATTGCTTCATCAGGTGCAAA
GGGCAAGCGCTTTATGCTTCCAAATGCAGAGTACATGATTCACCAGCCTATGGGAGGCACAGGTGGTGGTACACAGCAGA
CAGATATGGCCATTGCGGCTGAGCATTTATTAAAGACACGTCACCGCTTGGAAAAGATTTTGGCACAAAATGCCGGTAAA
ACGATCAAACAAATCCATAAGGACGCTGAGCGTGATTACTGGATGAGCGCAGAAGAGACCCTAGCCTATGGCTTTATTGA
TGAAATTATGGAAAATAATGAGCTAGCTTAG

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	99.487	99.49	0.99
clpP	Streptococcus pyogenes JRS4	99.487	99.49	0.99
clpP	Streptococcus pneumoniae Rx1	91.282	99.49	0.908
clpP	Streptococcus pneumoniae D39	91.282	99.49	0.908
clpP	Streptococcus pneumoniae R6	91.282	99.49	0.908
clpP	Streptococcus mutans UA159	91.282	99.49	0.908
clpP	Streptococcus pneumoniae TIGR4	91.282	99.49	0.908
clpP	Streptococcus thermophilus LMG 18311	89.231	99.49	0.888
clpP	Streptococcus thermophilus LMD-9	89.231	99.49	0.888
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.641	99.49	0.852
clpP	Lactococcus lactis subsp. cremoris KW2	85.128	99.49	0.847
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.513	98.469	0.566
clpP	Bacillus subtilis subsp. subtilis str. 168	57.216	98.98	0.566