Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   V6U66_RS02610 Genome accession   NZ_CP145864
Coordinates   494678..494863 (+) Length   61 a.a.
NCBI ID   WP_410534556.1    Uniprot ID   -
Organism   Streptococcus salivarius strain KSS7     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 489678..499863
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V6U66_RS02575 (V6U66_02580) - 489867..490223 (+) 357 WP_002887325.1 hypothetical protein -
  V6U66_RS02580 (V6U66_02585) - 490248..490874 (+) 627 WP_002887324.1 hypothetical protein -
  V6U66_RS02585 (V6U66_02590) - 490886..491047 (+) 162 WP_002887323.1 hypothetical protein -
  V6U66_RS02590 (V6U66_02595) - 491250..491840 (+) 591 WP_002887321.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein -
  V6U66_RS02595 (V6U66_02600) - 491840..492676 (+) 837 WP_002887320.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein -
  V6U66_RS02600 (V6U66_02605) - 493165..493662 (+) 498 WP_002887319.1 NUDIX hydrolase -
  V6U66_RS02605 (V6U66_02610) - 493659..494099 (+) 441 WP_002887318.1 ASCH domain-containing protein -
  V6U66_RS02610 (V6U66_02615) prx 494678..494863 (+) 186 WP_410534556.1 Paratox Regulator
  V6U66_RS02615 (V6U66_02620) - 494926..495612 (-) 687 WP_410534646.1 sensor histidine kinase -
  V6U66_RS02620 - 495630..495680 (+) 51 WP_410534648.1 hypothetical protein -
  V6U66_RS02625 (V6U66_02625) - 495687..496295 (+) 609 WP_410534557.1 hypothetical protein -
  V6U66_RS02630 (V6U66_02630) - 496375..496842 (+) 468 WP_045772495.1 8-oxo-dGTP diphosphatase -
  V6U66_RS02635 (V6U66_02635) - 497657..498274 (+) 618 WP_005376691.1 SAP domain-containing protein -

Sequence


Protein


Download         Length: 61 a.a.        Molecular weight: 7125.13 Da        Isoelectric Point: 4.2182

>NTDB_id=853587 V6U66_RS02610 WP_410534556.1 494678..494863(+) (prx) [Streptococcus salivarius strain KSS7]
MITYDEVMEAIERGFIKGDKISIVRRNGKIHDYVLPGEKVESEEIVEKEDLDVVLEELKEF

Nucleotide


Download         Length: 186 bp        

>NTDB_id=853587 V6U66_RS02610 WP_410534556.1 494678..494863(+) (prx) [Streptococcus salivarius strain KSS7]
ATGATAACATATGATGAAGTAATGGAAGCGATAGAAAGAGGGTTTATCAAGGGCGATAAAATCAGCATTGTCCGACGAAA
TGGGAAGATTCATGATTATGTTTTACCAGGAGAGAAAGTAGAATCTGAAGAAATAGTGGAAAAAGAGGACTTAGATGTTG
TCCTTGAAGAGTTGAAGGAGTTCTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

55.172

95.082

0.525

  prx Streptococcus pyogenes MGAS8232

55.172

95.082

0.525

  prx Streptococcus pyogenes MGAS315

53.448

95.082

0.508

  prx Streptococcus pyogenes MGAS315

51.724

95.082

0.492

  prx Streptococcus pyogenes MGAS315

60.465

70.492

0.426

  prx Streptococcus pyogenes MGAS315

58.14

70.492

0.41

  prx Streptococcus pyogenes MGAS315

54.762

68.852

0.377