Detailed information NTG0853384

Bioinformatically predicted

Overview

• Name: comR/comR1
• Type: Regulator
• Locus tag: V6U64_RS03895
• Genome accession: NZ_CP145862
• Coordinates: 869491..870399 (-)
• Length: 302 a.a.
• NCBI ID: WP_410537089.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain KSS4
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 864491..875399

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6U64_RS03870 (V6U64_03865)	-	865101..865280 (+)	180	Protein_743	ABC-2 family transporter protein	-
V6U64_RS03875 (V6U64_03870)	-	865319..865780 (+)	462	WP_285955412.1	GNAT family N-acetyltransferase	-
V6U64_RS03880 (V6U64_03875)	-	866297..867541 (+)	1245	WP_410537083.1	hypothetical protein	-
V6U64_RS03885 (V6U64_03880)	-	867607..868512 (+)	906	WP_410537085.1	hypothetical protein	-
V6U64_RS03890 (V6U64_03885)	-	868490..869356 (+)	867	WP_410537087.1	hypothetical protein	-
V6U64_RS03895 (V6U64_03890)	comR/comR1	869491..870399 (-)	909	WP_410537089.1	XRE family transcriptional regulator	Regulator
V6U64_RS03900 (V6U64_03895)	-	870557..871276 (-)	720	WP_410537091.1	ABC transporter permease	-
V6U64_RS03905 (V6U64_03900)	-	871269..872105 (-)	837	WP_410537093.1	ABC transporter ATP-binding protein	-
V6U64_RS03910 (V6U64_03905)	comR/comR1	872191..873102 (-)	912	WP_410537095.1	XRE family transcriptional regulator	Regulator
V6U64_RS03915 (V6U64_03910)	-	873320..873841 (+)	522	WP_226973104.1	RDD family protein	-
V6U64_RS03920 (V6U64_03915)	-	873965..874885 (+)	921	WP_272159343.1	multidrug resistance efflux transporter family protein	-

Sequence

Protein

• Length: 302 a.a.
• Molecular weight: 35741.26 Da
• Isoelectric Point: 4.5416

>NTDB_id=853384 V6U64_RS03895 WP_410537089.1 869491..870399(-) (comR/comR1) [Streptococcus salivarius strain KSS4]
MSDDIKIEIGKRIREERERIGLTREQVCDTEEELTVKQLMRIELGRSLPTIVKLQYISDKLGVSLNYLLGETKLDIPEDY
YKAKYKLMKSPVYGDPERIKKKLKDIEELYDNYIDILPEDELFAIDIIERTLNFMVMEEDSLIESLFEDYLTQALKKEAY
SLNDLLLISYYALRCQDYDYDKGIIDEFRRKLIKQELQGEELFNIELMGALTSIAGIYVMHHDYKDMKSVVDKLYEIMHS
CMQHSYQPGIIVFEAKYYLFYENNRDKATELYKMATVLAEAFGDEVFIKNLKMEMEKDLNIK

Nucleotide

• Length: 909 bp

>NTDB_id=853384 V6U64_RS03895 WP_410537089.1 869491..870399(-) (comR/comR1) [Streptococcus salivarius strain KSS4]
ATGTCTGATGATATTAAAATCGAGATTGGAAAAAGAATTCGTGAAGAACGTGAACGAATAGGTTTAACACGTGAGCAAGT
TTGTGACACCGAAGAAGAATTAACCGTCAAACAGCTGATGAGAATTGAGCTCGGTCGCTCATTACCAACTATTGTCAAAC
TGCAGTATATCAGTGATAAATTAGGAGTTTCCCTCAACTATTTGCTAGGTGAAACAAAACTAGACATTCCTGAAGACTAT
TACAAGGCTAAATATAAACTCATGAAGTCTCCTGTCTATGGCGACCCCGAACGTATCAAGAAGAAGCTAAAAGATATTGA
GGAACTCTACGACAACTATATTGATATTCTACCAGAGGACGAGCTTTTTGCTATTGATATCATTGAAAGAACGTTAAATT
TTATGGTTATGGAAGAAGATAGTCTTATTGAATCTTTATTTGAAGACTATTTGACTCAAGCTTTGAAAAAAGAAGCATAT
TCCTTAAATGACCTTCTATTAATTTCATACTATGCATTACGATGTCAGGATTATGACTATGATAAAGGAATAATTGACGA
ATTTAGACGTAAATTAATTAAGCAAGAATTACAAGGTGAAGAGCTGTTTAATATTGAATTAATGGGAGCTCTAACATCTA
TAGCTGGTATTTACGTCATGCATCATGACTATAAAGACATGAAATCTGTTGTAGATAAATTGTATGAGATTATGCATTCA
TGTATGCAACATTCCTATCAACCAGGTATCATAGTTTTTGAAGCGAAATACTATCTCTTCTATGAGAACAATAGAGATAA
AGCAACTGAACTTTACAAAATGGCTACCGTACTAGCCGAAGCCTTCGGTGATGAAGTATTTATAAAAAACCTAAAAATGG
AAATGGAAAAAGATTTAAACATAAAATAG

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (77-295)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR/comR1	Streptococcus sobrinus strain NIDR 6715-7	38.983	97.682	0.381
comR	Streptococcus thermophilus LMD-9	39.31	96.026	0.377
comR	Streptococcus thermophilus LMG 18311	39.31	96.026	0.377
comR	Streptococcus salivarius strain HSISS4	38.966	96.026	0.374
comR	Streptococcus salivarius SK126	39.085	94.04	0.368
comR/comR2	Streptococcus sobrinus strain NIDR 6715-7	38.144	96.358	0.368