Detailed information NTG0852517

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: QYM22_RS21970
• Genome accession: NZ_CP129342
• Coordinates: 4187246..4187818 (-)
• Length: 190 a.a.
• NCBI ID: WP_046130346.1
• Uniprot ID: A0AAE2EQA8
• Organism: Bacillus glycinifermentans strain SRCM12603
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 4182246..4192818

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYM22_RS21945 (QYM22_21945)	-	4182457..4182867 (-)	411	WP_046130351.1	CBS domain-containing protein	-
QYM22_RS21950 (QYM22_21950)	-	4182934..4183887 (-)	954	WP_046130350.1	magnesium transporter CorA family protein	-
QYM22_RS21955 (QYM22_21955)	-	4184045..4185343 (+)	1299	WP_046130349.1	hemolysin family protein	-
QYM22_RS21960 (QYM22_21960)	-	4185500..4186711 (+)	1212	WP_046130348.1	ammonium transporter	-
QYM22_RS21965 (QYM22_21965)	-	4186730..4187080 (+)	351	WP_046130347.1	P-II family nitrogen regulator	-
QYM22_RS21970 (QYM22_21970)	clpP	4187246..4187818 (-)	573	WP_046130346.1	ATP-dependent Clp protease proteolytic subunit	Regulator
QYM22_RS21975 (QYM22_21975)	-	4187832..4188440 (-)	609	WP_046130345.1	sigma-70 family RNA polymerase sigma factor	-
QYM22_RS21980 (QYM22_21980)	-	4188572..4189435 (-)	864	WP_046130344.1	M23 family metallopeptidase	-
QYM22_RS21985 (QYM22_21985)	-	4189580..4190086 (+)	507	WP_046130343.1	GNAT family N-acetyltransferase	-
QYM22_RS21990 (QYM22_21990)	-	4190133..4190576 (-)	444	WP_046130342.1	YwnF family protein	-
QYM22_RS21995 (QYM22_21995)	cls	4190814..4192262 (+)	1449	WP_046130358.1	cardiolipin synthase	-

Sequence

Protein

• Length: 190 a.a.
• Molecular weight: 21079.26 Da
• Isoelectric Point: 5.1114

>NTDB_id=852517 QYM22_RS21970 WP_046130346.1 4187246..4187818(-) (clpP) [Bacillus glycinifermentans strain SRCM12603]
MNTIPYVIEKTAAGERSYDIFSRLLKDRIIMIGSEFTDDLANRVTAQLLFLSAEDNEKDISVYINSPGGSTSAGYAILDT
MEYVKPDVRTICVGMAASMGAIILAGGTKGKRFALKNSEIMIHQPLGGVKGQATDMEISARRIIKLKDKIQQFFHERTGQ
PLEKLKEDMERDYFMDAEEAKAYGIVDAVL

Nucleotide

• Length: 573 bp

>NTDB_id=852517 QYM22_RS21970 WP_046130346.1 4187246..4187818(-) (clpP) [Bacillus glycinifermentans strain SRCM12603]
ATGAACACCATTCCTTATGTTATTGAAAAAACAGCGGCAGGAGAAAGATCCTACGATATTTTTTCAAGGCTTTTGAAAGA
CCGCATCATTATGATCGGCTCTGAATTTACGGACGATCTCGCCAATCGCGTCACCGCCCAGCTGCTGTTTTTGTCGGCGG
AGGACAATGAAAAGGACATTTCGGTCTATATCAACAGCCCCGGCGGATCAACCTCTGCCGGATATGCGATTTTAGATACG
ATGGAGTACGTGAAGCCGGATGTTCGCACGATCTGCGTCGGGATGGCGGCTTCGATGGGGGCGATCATCCTTGCGGGCGG
AACGAAGGGAAAGAGGTTTGCCCTTAAAAACAGCGAAATCATGATCCACCAGCCGCTCGGCGGCGTCAAAGGACAGGCGA
CGGACATGGAGATTTCCGCGAGGCGGATCATCAAGCTGAAGGACAAAATCCAGCAGTTCTTCCATGAACGGACGGGTCAG
CCGCTTGAAAAACTAAAAGAAGACATGGAACGCGACTATTTTATGGATGCCGAAGAAGCGAAGGCTTACGGTATTGTTGA
TGCAGTTTTGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-190)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	64.211	100	0.642
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.497	98.421	0.605
clpP	Streptococcus thermophilus LMG 18311	55.556	99.474	0.553
clpP	Streptococcus thermophilus LMD-9	55.556	99.474	0.553
clpP	Streptococcus pyogenes MGAS315	54.497	99.474	0.542
clpP	Streptococcus pyogenes JRS4	54.497	99.474	0.542
clpP	Streptococcus pneumoniae D39	53.968	99.474	0.537
clpP	Streptococcus pneumoniae Rx1	53.968	99.474	0.537
clpP	Streptococcus pneumoniae R6	53.968	99.474	0.537
clpP	Streptococcus pneumoniae TIGR4	53.968	99.474	0.537
clpP	Streptococcus mutans UA159	53.439	99.474	0.532
clpP	Lactococcus lactis subsp. cremoris KW2	52.91	99.474	0.526
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	52.381	99.474	0.521