Detailed information NTG0852269

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: QYR55_RS07270
• Genome accession: NZ_CP129328
• Coordinates: 1473368..1473970 (-)
• Length: 200 a.a.
• NCBI ID: WP_367562546.1
• Uniprot ID: -
• Organism: Streptococcus iniae strain Si 1-19
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1468368..1478970

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QYR55_RS07240 (QYR55_07245)	-	1468943..1469896 (-)	954	WP_367562544.1	branched-chain amino acid ABC transporter permease	-
QYR55_RS07245 (QYR55_07250)	-	1469900..1470769 (-)	870	WP_367562545.1	branched-chain amino acid ABC transporter permease	-
QYR55_RS07250 (QYR55_07255)	-	1470829..1472002 (-)	1174	Protein_1375	ABC transporter substrate-binding protein	-
QYR55_RS07255 (QYR55_07260)	-	1472148..1472426 (-)	279	WP_003101541.1	YlbG family protein	-
QYR55_RS07260 (QYR55_07265)	-	1472402..1472872 (-)	471	WP_367561440.1	YlbF family regulator	-
QYR55_RS07265 (QYR55_07270)	-	1473001..1473246 (-)	246	WP_003101546.1	hypothetical protein	-
QYR55_RS07270 (QYR55_07275)	clpP	1473368..1473970 (-)	603	WP_367562546.1	ATP-dependent Clp protease proteolytic subunit	Regulator
QYR55_RS07275 (QYR55_07280)	upp	1474186..1474815 (-)	630	WP_367562186.1	uracil phosphoribosyltransferase	-
QYR55_RS07280 (QYR55_07285)	-	1474960..1476613 (-)	1654	Protein_1381	oligosaccharide flippase family protein	-
QYR55_RS07285 (QYR55_07290)	-	1476701..1478147 (+)	1447	Protein_1382	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-

Sequence

Protein

• Length: 200 a.a.
• Molecular weight: 22222.63 Da
• Isoelectric Point: 6.3409

>NTDB_id=852269 QYR55_RS07270 WP_367562546.1 1473368..1473970(-) (clpP) [Streptococcus iniae strain Si 1-19]
MENTMIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDHTKDIYLYVNTPGGSVSAGLAIV
DTMNFIKSDVQTIVMGMVASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQSDMAIVAEHLLKTRHTLEKILAK
NSGKTIKQVHKDAERDYWMSAEETLKYGFIDEIMENNKLK

Nucleotide

• Length: 603 bp

>NTDB_id=852269 QYR55_RS07270 WP_367562546.1 1473368..1473970(-) (clpP) [Streptococcus iniae strain Si 1-19]
ATGGAGAATACTATGATTCCTGTAGTTATTGAACAAACAAGTCGTGGGGAGCGTTCTTACGATATTTACTCTCGTTTACT
AAAAGATCGGATCATCATGTTAACTGGTCCGGTCGAAGACAATATGGCTAACTCTGTCATTGCACAGTTGCTTTTTTTGG
ATGCACAAGATCACACTAAAGATATTTATCTTTATGTTAATACCCCAGGTGGTTCCGTTTCTGCTGGTTTAGCCATTGTT
GATACAATGAACTTTATTAAATCTGATGTTCAAACAATTGTCATGGGAATGGTCGCTTCCATGGGAACAATCATTGCCTC
ATCAGGGACTAAAGGGAAACGGTTCATGTTGCCAAATGCTGAATACATGATTCACCAACCAATGGGTGGTACAGGTGGTG
GTACGCAGCAATCAGATATGGCAATTGTCGCTGAACATCTCTTAAAAACACGTCACACTCTTGAAAAAATATTGGCAAAA
AATAGTGGAAAAACCATTAAACAAGTTCATAAAGATGCAGAACGTGATTATTGGATGAGTGCAGAAGAAACACTAAAATA
TGGCTTCATTGATGAAATTATGGAAAATAACAAACTTAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (15-196)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes JRS4	93.878	98	0.92
clpP	Streptococcus pyogenes MGAS315	93.878	98	0.92
clpP	Streptococcus mutans UA159	90.355	98.5	0.89
clpP	Streptococcus thermophilus LMD-9	89.796	98	0.88
clpP	Streptococcus thermophilus LMG 18311	89.796	98	0.88
clpP	Streptococcus pneumoniae R6	89.744	97.5	0.875
clpP	Streptococcus pneumoniae Rx1	89.744	97.5	0.875
clpP	Streptococcus pneumoniae D39	89.744	97.5	0.875
clpP	Streptococcus pneumoniae TIGR4	89.744	97.5	0.875
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.714	98	0.84
clpP	Lactococcus lactis subsp. cremoris KW2	85.204	98	0.835
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.959	96.5	0.54
clpP	Bacillus subtilis subsp. subtilis str. 168	55.789	95	0.53