Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | QTN48_RS03280 | Genome accession | NZ_CP128503 |
| Coordinates | 644487..645083 (-) | Length | 198 a.a. |
| NCBI ID | WP_003151513.1 | Uniprot ID | I2CAH7 |
| Organism | Bacillus velezensis strain SRCM123422 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 644487..686327 | 644487..645083 | within | 0 |
Gene organization within MGE regions
Location: 644487..686327
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QTN48_RS03280 (QTN48_03280) | clpP | 644487..645083 (-) | 597 | WP_003151513.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| QTN48_RS03285 (QTN48_03285) | - | 645327..646301 (-) | 975 | WP_015418285.1 | LacI family DNA-binding transcriptional regulator | - |
| QTN48_RS03290 (QTN48_03290) | - | 646689..647921 (+) | 1233 | WP_017418854.1 | MFS transporter | - |
| QTN48_RS03295 (QTN48_03295) | - | 647936..649405 (+) | 1470 | WP_014418948.1 | glycoside hydrolase family 32 protein | - |
| QTN48_RS03305 (QTN48_03305) | - | 649896..650885 (+) | 990 | WP_289394737.1 | tyrosine-type recombinase/integrase | - |
| QTN48_RS03310 (QTN48_03310) | - | 651044..651760 (+) | 717 | WP_289394738.1 | helix-turn-helix domain-containing protein | - |
| QTN48_RS03315 (QTN48_03315) | - | 651969..652505 (+) | 537 | WP_094247065.1 | tyrosine-type recombinase/integrase | - |
| QTN48_RS03320 (QTN48_03320) | - | 653083..653322 (-) | 240 | WP_032861982.1 | helix-turn-helix transcriptional regulator | - |
| QTN48_RS03325 (QTN48_03325) | - | 653503..653649 (+) | 147 | WP_164965954.1 | hypothetical protein | - |
| QTN48_RS03330 (QTN48_03330) | - | 653912..654250 (+) | 339 | WP_025853896.1 | hypothetical protein | - |
| QTN48_RS03335 (QTN48_03335) | - | 654471..654686 (-) | 216 | WP_025853897.1 | helix-turn-helix transcriptional regulator | - |
| QTN48_RS03340 (QTN48_03340) | - | 654807..655982 (+) | 1176 | WP_110085450.1 | AimR family lysis-lysogeny pheromone receptor | - |
| QTN48_RS03345 (QTN48_03345) | - | 656516..657058 (+) | 543 | WP_110085451.1 | hypothetical protein | - |
| QTN48_RS03350 (QTN48_03350) | - | 657096..657395 (+) | 300 | WP_039063559.1 | hypothetical protein | - |
| QTN48_RS03355 (QTN48_03355) | - | 657392..657733 (+) | 342 | WP_289394739.1 | hypothetical protein | - |
| QTN48_RS03360 (QTN48_03360) | - | 658295..659494 (+) | 1200 | WP_223257605.1 | hypothetical protein | - |
| QTN48_RS21865 | - | 659542..659685 (+) | 144 | WP_223203794.1 | DUF5659 domain-containing protein | - |
| QTN48_RS03365 (QTN48_03365) | - | 659706..660200 (+) | 495 | WP_110085453.1 | hypothetical protein | - |
| QTN48_RS03370 (QTN48_03370) | - | 660406..660555 (+) | 150 | WP_228841472.1 | hypothetical protein | - |
| QTN48_RS03375 (QTN48_03375) | - | 660552..660764 (+) | 213 | WP_110085454.1 | hypothetical protein | - |
| QTN48_RS03380 (QTN48_03380) | - | 660896..661096 (+) | 201 | WP_039063552.1 | hypothetical protein | - |
| QTN48_RS03385 (QTN48_03385) | - | 661075..661443 (+) | 369 | WP_039063551.1 | hypothetical protein | - |
| QTN48_RS03390 (QTN48_03390) | - | 661440..661922 (+) | 483 | WP_110085142.1 | hypothetical protein | - |
| QTN48_RS03395 (QTN48_03395) | - | 661933..662586 (+) | 654 | WP_110085455.1 | hypothetical protein | - |
| QTN48_RS03400 (QTN48_03400) | - | 662623..663330 (+) | 708 | WP_110085456.1 | hypothetical protein | - |
| QTN48_RS03405 (QTN48_03405) | - | 663406..663627 (+) | 222 | WP_094247051.1 | hypothetical protein | - |
| QTN48_RS03410 (QTN48_03410) | - | 663624..664232 (+) | 609 | WP_039063547.1 | phage tail tape measure protein | - |
| QTN48_RS03415 (QTN48_03415) | - | 664481..666736 (+) | 2256 | WP_289394745.1 | phage tail tape measure protein | - |
| QTN48_RS03420 (QTN48_03420) | - | 666815..667117 (+) | 303 | WP_039063545.1 | hypothetical protein | - |
| QTN48_RS03425 (QTN48_03425) | - | 667410..667721 (-) | 312 | WP_007407407.1 | hypothetical protein | - |
| QTN48_RS03430 (QTN48_03430) | - | 667738..669156 (-) | 1419 | WP_110085642.1 | lipase | - |
| QTN48_RS03435 (QTN48_03435) | - | 669267..669554 (+) | 288 | WP_017418857.1 | DUF1433 domain-containing protein | - |
| QTN48_RS03440 (QTN48_03440) | - | 669768..670052 (+) | 285 | WP_050556579.1 | DUF1433 domain-containing protein | - |
| QTN48_RS03445 (QTN48_03445) | - | 670296..670454 (+) | 159 | WP_017418859.1 | DUF3237 family protein | - |
| QTN48_RS03450 (QTN48_03450) | - | 670476..670964 (+) | 489 | WP_014305882.1 | phenolic acid decarboxylase | - |
| QTN48_RS03455 (QTN48_03455) | - | 671005..671523 (-) | 519 | WP_025649312.1 | GNAT family N-acetyltransferase | - |
| QTN48_RS03460 (QTN48_03460) | - | 671657..672286 (+) | 630 | WP_014305880.1 | YitT family protein | - |
| QTN48_RS03465 (QTN48_03465) | - | 672366..672896 (+) | 531 | WP_017418861.1 | dihydrofolate reductase family protein | - |
| QTN48_RS03470 (QTN48_03470) | - | 672928..673128 (-) | 201 | WP_014418938.1 | hypothetical protein | - |
| QTN48_RS03475 (QTN48_03475) | - | 673270..674718 (-) | 1449 | WP_025649311.1 | carboxylesterase/lipase family protein | - |
| QTN48_RS03480 (QTN48_03480) | slrR | 674799..675254 (-) | 456 | WP_017418863.1 | HTH-type transcriptional regulator SlrR | - |
| QTN48_RS03485 (QTN48_03485) | - | 675498..676205 (+) | 708 | WP_017418864.1 | Wzz/FepE/Etk N-terminal domain-containing protein | - |
| QTN48_RS03490 (QTN48_03490) | - | 676211..676891 (+) | 681 | WP_007407393.1 | CpsD/CapB family tyrosine-protein kinase | - |
| QTN48_RS03495 (QTN48_03495) | - | 677112..678929 (+) | 1818 | WP_195182923.1 | nucleoside-diphosphate sugar epimerase/dehydratase | - |
| QTN48_RS03500 (QTN48_03500) | - | 678945..680084 (+) | 1140 | WP_014305877.1 | glycosyltransferase family 4 protein | - |
| QTN48_RS03505 (QTN48_03505) | - | 680081..680923 (+) | 843 | WP_015387673.1 | glycosyltransferase family 2 protein | - |
| QTN48_RS03510 (QTN48_03510) | - | 680916..682052 (+) | 1137 | WP_017418867.1 | glycosyltransferase family 1 protein | - |
| QTN48_RS03515 (QTN48_03515) | - | 682056..683159 (+) | 1104 | WP_007613926.1 | EpsG family protein | - |
| QTN48_RS03520 (QTN48_03520) | - | 683178..684215 (+) | 1038 | WP_017418868.1 | glycosyltransferase family 2 protein | - |
| QTN48_RS03525 (QTN48_03525) | - | 684220..685296 (+) | 1077 | WP_017418869.1 | polysaccharide pyruvyl transferase family protein | - |
| QTN48_RS03530 (QTN48_03530) | - | 685293..686327 (+) | 1035 | WP_017418870.1 | glycosyltransferase | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21831.06 Da Isoelectric Point: 4.6982
>NTDB_id=847899 QTN48_RS03280 WP_003151513.1 644487..645083(-) (clpP) [Bacillus velezensis strain SRCM123422]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSADEALEYGLIDKVLTRNTEDQK
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSADEALEYGLIDKVLTRNTEDQK
Nucleotide
Download Length: 597 bp
>NTDB_id=847899 QTN48_RS03280 WP_003151513.1 644487..645083(-) (clpP) [Bacillus velezensis strain SRCM123422]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGAGAAAGAGCTTATGACATTTACTCCCGTCTTTTGAAGGA
CCGTATTATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCCTTGAAGCGG
AAGACCCTGAAAAAGATATTTCCATTTACATTAACAGCCCTGGCGGATCAATCACTGCCGGTATGGCAATCTATGATACA
ATGCAGTTCATTAAACCGAAAGTATCCACGATCTGCATCGGTATGGCCGCTTCTATGGGAGCATTTTTACTTGCAGCCGG
AGAAAAAGGCAAACGTTACGCGCTTCCTAACAGTGAAGTTATGATTCACCAGCCGCTTGGCGGAGCGCAAGGACAGGCGA
CAGAAATTGAAATCGCGGCAAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTGCTTGCTGAACGTACCGGCCAG
CCGCTTGAAGTCATTGAGCGCGATACAGACCGCGACAACTTCAAATCAGCTGATGAAGCCTTAGAATACGGCTTAATCGA
TAAAGTGCTGACACGCAATACAGAAGACCAGAAGTAA
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGAGAAAGAGCTTATGACATTTACTCCCGTCTTTTGAAGGA
CCGTATTATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCCTTGAAGCGG
AAGACCCTGAAAAAGATATTTCCATTTACATTAACAGCCCTGGCGGATCAATCACTGCCGGTATGGCAATCTATGATACA
ATGCAGTTCATTAAACCGAAAGTATCCACGATCTGCATCGGTATGGCCGCTTCTATGGGAGCATTTTTACTTGCAGCCGG
AGAAAAAGGCAAACGTTACGCGCTTCCTAACAGTGAAGTTATGATTCACCAGCCGCTTGGCGGAGCGCAAGGACAGGCGA
CAGAAATTGAAATCGCGGCAAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTGCTTGCTGAACGTACCGGCCAG
CCGCTTGAAGTCATTGAGCGCGATACAGACCGCGACAACTTCAAATCAGCTGATGAAGCCTTAGAATACGGCTTAATCGA
TAAAGTGCTGACACGCAATACAGAAGACCAGAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
95.96 |
100 |
0.96 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.586 |
96.465 |
0.662 |
| clpP | Streptococcus thermophilus LMG 18311 |
58.549 |
97.475 |
0.571 |
| clpP | Streptococcus thermophilus LMD-9 |
58.549 |
97.475 |
0.571 |
| clpP | Streptococcus pneumoniae D39 |
57.216 |
97.98 |
0.561 |
| clpP | Streptococcus pneumoniae Rx1 |
57.216 |
97.98 |
0.561 |
| clpP | Streptococcus pneumoniae R6 |
57.216 |
97.98 |
0.561 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.216 |
97.98 |
0.561 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pyogenes JRS4 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus pyogenes MGAS315 |
55.44 |
97.475 |
0.54 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
54.639 |
97.98 |
0.535 |
| clpP | Streptococcus mutans UA159 |
54.639 |
97.98 |
0.535 |