Detailed information NTG0847343

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: QSV38_RS09510
• Genome accession: NZ_CP128410
• Coordinates: 1825709..1826299 (+)
• Length: 196 a.a.
• NCBI ID: WP_274504107.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain 7500
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1820709..1831299

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QSV38_RS09490 (QSV38_09490)	-	1820845..1821675 (+)	831	WP_171989738.1	carbohydrate ABC transporter permease	-
QSV38_RS09495 (QSV38_09495)	gtfA	1821744..1823192 (+)	1449	WP_274504108.1	sucrose phosphorylase	-
QSV38_RS09500 (QSV38_09500)	-	1823262..1824878 (+)	1617	WP_289648631.1	alpha-amylase family glycosyl hydrolase	-
QSV38_RS09505 (QSV38_09505)	upp	1824958..1825587 (+)	630	WP_024391947.1	uracil phosphoribosyltransferase	-
QSV38_RS09510 (QSV38_09510)	clpP	1825709..1826299 (+)	591	WP_274504107.1	ATP-dependent Clp protease proteolytic subunit	Regulator
QSV38_RS09515 (QSV38_09515)	-	1826416..1826703 (+)	288	WP_217374004.1	DUF2129 domain-containing protein	-
QSV38_RS09520 (QSV38_09520)	-	1826868..1828037 (+)	1170	WP_289648632.1	ABC transporter substrate-binding protein	-
QSV38_RS09525 (QSV38_09525)	-	1828318..1829205 (+)	888	WP_274504106.1	branched-chain amino acid ABC transporter permease	-
QSV38_RS09530 (QSV38_09530)	-	1829208..1830155 (+)	948	WP_274504105.1	branched-chain amino acid ABC transporter permease	-
QSV38_RS09535 (QSV38_09535)	-	1830155..1830919 (+)	765	WP_024391941.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21556.75 Da
• Isoelectric Point: 5.7074

>NTDB_id=847343 QSV38_RS09510 WP_274504107.1 1825709..1826299(+) (clpP) [Streptococcus parasuis strain 7500]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDPTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGTAASMGTIIASSGTKGKRFMLPNAEYLIHQPMGGTGGGTQQTDMAIAAEHLLNTRNKLEKILAENSGK
TVKQIHKDAERDYWMSAEETLAYGFIDQIMYNTKTK

Nucleotide

• Length: 591 bp

>NTDB_id=847343 QSV38_RS09510 WP_274504107.1 1825709..1826299(+) (clpP) [Streptococcus parasuis strain 7500]
ATGATTCCAGTAGTTATTGAACAAACTAGTCGCGGTGAGCGCTCGTATGATATTTATTCACGTTTGCTGAAAGACCGCAT
CATTATGTTGACAGGTCCGGTTGAGGACAATATGGCCAATTCGATTATTGCCCAATTGCTTTTCCTAGATGCACAAGATC
CAACAAAAGATATTTATCTCTATGTAAATACACCAGGGGGTTCTGTTTCTGCAGGTCTTGCCATCGTGGATACAATGAAC
TTCATTAAAGCAGACGTACAGACAATTGTAATGGGTACTGCAGCAAGTATGGGAACAATCATTGCTTCAAGTGGTACAAA
AGGCAAACGTTTCATGCTTCCTAATGCAGAATACTTGATTCACCAACCAATGGGAGGCACTGGTGGTGGTACTCAGCAAA
CTGACATGGCAATTGCAGCAGAACACCTCTTAAATACTCGTAACAAGTTAGAAAAAATCTTGGCGGAAAATTCTGGTAAG
ACAGTCAAACAAATCCATAAGGATGCAGAACGTGACTATTGGATGTCTGCTGAAGAAACCTTGGCATACGGCTTTATCGA
CCAAATTATGTATAATACAAAGACTAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-191)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes JRS4	91.837	100	0.918
clpP	Streptococcus pyogenes MGAS315	91.837	100	0.918
clpP	Streptococcus mutans UA159	89.286	100	0.893
clpP	Streptococcus thermophilus LMD-9	87.755	100	0.878
clpP	Streptococcus thermophilus LMG 18311	87.755	100	0.878
clpP	Streptococcus pneumoniae R6	89.583	97.959	0.878
clpP	Streptococcus pneumoniae Rx1	89.583	97.959	0.878
clpP	Streptococcus pneumoniae D39	89.583	97.959	0.878
clpP	Streptococcus pneumoniae TIGR4	89.583	97.959	0.878
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	84.184	100	0.842
clpP	Lactococcus lactis subsp. cremoris KW2	83.673	100	0.837
clpP	Bacillus subtilis subsp. subtilis str. 168	58.163	100	0.582
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.421	96.939	0.566