Detailed information NTG0084486

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: L6410_RS06985
• Genome accession: NZ_AP024276
• Coordinates: 1396376..1396987 (-)
• Length: 203 a.a.
• NCBI ID: WP_228380341.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain SUT-286
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1391376..1401987

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L6410_RS06960 (SUT286_13430)	-	1391646..1392410 (-)	765	WP_237395193.1	ABC transporter ATP-binding protein	-
L6410_RS06965 (SUT286_13440)	-	1392410..1393357 (-)	948	WP_237395194.1	branched-chain amino acid ABC transporter permease	-
L6410_RS06970 (SUT286_13450)	-	1393360..1394247 (-)	888	WP_024391943.1	branched-chain amino acid ABC transporter permease	-
L6410_RS06975 (SUT286_13460)	-	1394637..1395806 (-)	1170	WP_237395195.1	ABC transporter substrate-binding protein	-
L6410_RS06980 (SUT286_13470)	-	1395972..1396259 (-)	288	WP_172040175.1	DUF2129 domain-containing protein	-
L6410_RS06985 (SUT286_13480)	clpP	1396376..1396987 (-)	612	WP_228380341.1	ATP-dependent Clp protease proteolytic subunit	Regulator
L6410_RS06990 (SUT286_13490)	-	1397306..1397812 (+)	507	Protein_1351	IS110 family transposase	-
L6410_RS07000 (SUT286_13510)	-	1398705..1399368 (+)	664	Protein_1353	transposase	-
L6410_RS07005 (SUT286_13520)	upp	1399613..1400242 (-)	630	WP_024391947.1	uracil phosphoribosyltransferase	-

Sequence

Protein

• Length: 203 a.a.
• Molecular weight: 22422.81 Da
• Isoelectric Point: 7.3134

>NTDB_id=84486 L6410_RS06985 WP_228380341.1 1396376..1396987(-) (clpP) [Streptococcus parasuis strain SUT-286]
MSKRSKFMIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGQVEDNMANSIIAQLLFLDAQDPTKDIYLYVNTPGGSVSAGL
AIVDTMNFIKADVQTIVMGTAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNKLEKI
LADNSGKTVKQIHKDAERDYWMSAEETLAYGFIDQIMDNTKTK

Nucleotide

• Length: 612 bp

>NTDB_id=84486 L6410_RS06985 WP_228380341.1 1396376..1396987(-) (clpP) [Streptococcus parasuis strain SUT-286]
ATCTCGAAAAGGAGTAAATTTATGATTCCAGTAGTTATTGAACAAACTAGTCGCGGTGAGCGCTCGTATGATATTTATTC
ACGTTTGCTGAAAGACCGCATCATTATGTTGACAGGTCAGGTTGAGGACAATATGGCCAATTCGATTATTGCCCAATTGC
TTTTCTTAGATGCACAAGATCCAACAAAAGATATTTATCTCTATGTAAATACACCAGGGGGTTCTGTTTCCGCAGGTCTT
GCCATCGTGGATACAATGAACTTCATTAAAGCAGACGTACAGACAATTGTAATGGGAACTGCAGCAAGTATGGGAACAAT
CATTGCTTCAAGTGGTACAAAAGGCAAACGTTTCATGCTTCCTAATGCAGAATACATGATTCATCAACCAATGGGAGGCA
CTGGTGGTGGTACTCAGCAAACTGACATGGCAATTGCAGCAGAACACCTCTTAAAAACTCGTAACAAGTTAGAAAAAATT
TTGGCGGACAATTCTGGTAAGACAGTCAAACAAATCCATAAGGATGCAGAACGTGACTATTGGATGTCTGCTGAAGAAAC
CTTGGCATACGGCTTTATCGACCAAATTATGGATAATACAAAGACTAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (18-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	92.347	96.552	0.892
clpP	Streptococcus pyogenes JRS4	92.347	96.552	0.892
clpP	Streptococcus mutans UA159	86.765	100	0.872
clpP	Streptococcus thermophilus LMD-9	88.776	96.552	0.857
clpP	Streptococcus thermophilus LMG 18311	88.776	96.552	0.857
clpP	Streptococcus pneumoniae Rx1	89.583	94.581	0.847
clpP	Streptococcus pneumoniae D39	89.583	94.581	0.847
clpP	Streptococcus pneumoniae R6	89.583	94.581	0.847
clpP	Streptococcus pneumoniae TIGR4	89.583	94.581	0.847
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	83.756	97.044	0.813
clpP	Lactococcus lactis subsp. cremoris KW2	83.249	97.044	0.808
clpP	Bacillus subtilis subsp. subtilis str. 168	58.163	96.552	0.562
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.031	95.074	0.552