Detailed information NTG0843500

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: QRA08_RS22370
• Genome accession: NZ_CP127331
• Coordinates: 4349333..4349914 (-)
• Length: 193 a.a.
• NCBI ID: WP_000991612.1
• Uniprot ID: A0AAN4HHP4
• Organism: Bacillus cereus strain BC116
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 4344333..4354914

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QRA08_RS22340 (QRA08_22285)	-	4344959..4345459 (-)	501	WP_003291689.1	HIT family protein	-
QRA08_RS22345 (QRA08_22290)	-	4345551..4345718 (-)	168	WP_000508401.1	hypothetical protein	-
QRA08_RS22350 (QRA08_22295)	-	4345936..4346172 (+)	237	WP_053564245.1	hypothetical protein	-
QRA08_RS22355 (QRA08_22300)	-	4346226..4347062 (-)	837	WP_016081306.1	proline/glycine betaine ABC transporter permease	-
QRA08_RS22360 (QRA08_22305)	-	4347055..4348260 (-)	1206	WP_000370606.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
QRA08_RS22365 (QRA08_22310)	-	4348432..4349289 (+)	858	WP_001227615.1	glycine betaine ABC transporter substrate-binding protein	-
QRA08_RS22370 (QRA08_22315)	clpP	4349333..4349914 (-)	582	WP_000991612.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
QRA08_RS22375 (QRA08_22320)	-	4349936..4350622 (-)	687	WP_327890306.1	RNA polymerase subunit sigma-70	-
QRA08_RS22380 (QRA08_22325)	-	4350765..4351085 (+)	321	WP_088023619.1	2Fe-2S iron-sulfur cluster-binding protein	-
QRA08_RS22385 (QRA08_22330)	rpiA	4351090..4351752 (+)	663	WP_001049982.1	ribose 5-phosphate isomerase A	-
QRA08_RS22390 (QRA08_22335)	-	4351858..4352292 (+)	435	WP_043935622.1	GNAT family N-acetyltransferase	-
QRA08_RS22395 (QRA08_22340)	-	4352420..4353787 (-)	1368	WP_406652692.1	lytic polysaccharide monooxygenase	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21250.48 Da
• Isoelectric Point: 4.9174

>NTDB_id=843500 QRA08_RS22370 WP_000991612.1 4349333..4349914(-) (clpP) [Bacillus cereus strain BC116]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKEYGIVDDVVTKK

Nucleotide

• Length: 582 bp

>NTDB_id=843500 QRA08_RS22370 WP_000991612.1 4349333..4349914(-) (clpP) [Bacillus cereus strain BC116]
ATGAATGCAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
CCGCATTATTATTATCGGTTCAGAAATTAATGATCAAGTAGCGAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCAG
AAGATGCAGAGAAAGATATATTCTTATACATCAATAGCCCCGGCGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTGTGCATGGGCTTTGCGGCATCATTTGGTGCATTGCTATTATTATCTGG
AGCAAAAGGAAAACGGTTTGCGCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACGGGCCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGAATATGGGATTGTAGA
TGATGTTGTTACGAAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	69.11	98.964	0.684
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.725	97.927	0.663
clpP	Streptococcus thermophilus LMD-9	55.729	99.482	0.554
clpP	Streptococcus pneumoniae Rx1	55.729	99.482	0.554
clpP	Streptococcus pneumoniae D39	55.729	99.482	0.554
clpP	Streptococcus pneumoniae TIGR4	55.729	99.482	0.554
clpP	Streptococcus pneumoniae R6	55.729	99.482	0.554
clpP	Streptococcus thermophilus LMG 18311	55.729	99.482	0.554
clpP	Streptococcus pyogenes JRS4	55.556	97.927	0.544
clpP	Streptococcus pyogenes MGAS315	55.556	97.927	0.544
clpP	Streptococcus mutans UA159	53.968	97.927	0.528
clpP	Lactococcus lactis subsp. cremoris KW2	52.91	97.927	0.518
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	50.794	97.927	0.497