Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   VKP34_RS03080 Genome accession   NZ_CP142358
Coordinates   583702..583890 (+) Length   62 a.a.
NCBI ID   WP_011054546.1    Uniprot ID   A0A0H2UUN1
Organism   Streptococcus pyogenes strain 6702-99     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 578702..588890
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP34_RS03050 (VKP34_03050) - 578965..579192 (+) 228 WP_136059203.1 phage holin -
  VKP34_RS03055 (VKP34_03055) - 579308..580513 (+) 1206 WP_136059204.1 glucosaminidase domain-containing protein -
  VKP34_RS03060 (VKP34_03060) - 580662..580826 (+) 165 WP_021340366.1 hypothetical protein -
  VKP34_RS03065 (VKP34_03065) - 580859..581419 (+) 561 WP_011018106.1 GNAT family N-acetyltransferase -
  VKP34_RS03070 (VKP34_03070) spem 581803..582516 (+) 714 WP_014635497.1 streptococcal pyrogenic exotoxin SpeM -
  VKP34_RS03075 (VKP34_03075) spel 582799..583587 (+) 789 WP_136059205.1 streptococcal pyrogenic exotoxin SpeL -
  VKP34_RS03080 (VKP34_03080) prx 583702..583890 (+) 189 WP_011054546.1 hypothetical protein Regulator
  VKP34_RS03090 (VKP34_03090) - 584481..585095 (+) 615 WP_002989607.1 TVP38/TMEM64 family protein -
  VKP34_RS03095 (VKP34_03095) - 585226..586011 (-) 786 WP_002984433.1 hypothetical protein -
  VKP34_RS03100 (VKP34_03100) - 586021..586719 (-) 699 WP_002992425.1 ABC transporter ATP-binding protein -
  VKP34_RS03105 (VKP34_03105) - 586719..587090 (-) 372 WP_002989617.1 GntR family transcriptional regulator -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7226.17 Da        Isoelectric Point: 3.9947

>NTDB_id=840876 VKP34_RS03080 WP_011054546.1 583702..583890(+) (prx) [Streptococcus pyogenes strain 6702-99]
MLTYDEFKQAIDDGYIVGDTVMIVRKNGQIFDYVLPHEEARNGEVVTEEKVEEVMVELDYIK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=840876 VKP34_RS03080 WP_011054546.1 583702..583890(+) (prx) [Streptococcus pyogenes strain 6702-99]
ATGCTAACATACGACGAATTTAAGCAAGCTATTGATGACGGATATATCGTAGGAGACACAGTTATGATCGTACGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAGGAAGCGAGAAATGGAGAAGTTGTGACAGAGGAGAAGGTGGAAGAAG
TGATGGTGGAATTAGACTATATCAAATGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UUN1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1
  prx Streptococcus pyogenes MGAS315

84.746

95.161

0.806
  prx Streptococcus pyogenes MGAS8232

84.483

93.548

0.79
  prx Streptococcus pyogenes MGAS315

82.759

93.548

0.774
  prx Streptococcus pyogenes MGAS315

77.966

95.161

0.742
  prx Streptococcus pyogenes MGAS315

87.805

66.129

0.581
  prx Streptococcus pyogenes MGAS315

76.19

67.742

0.516