Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   VKP36_RS05710 Genome accession   NZ_CP142357
Coordinates   1140052..1140234 (-) Length   60 a.a.
NCBI ID   WP_014635572.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain AW-534     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1135052..1145234
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP36_RS05695 (VKP36_05695) - 1135489..1136184 (-) 696 WP_002983928.1 phosphoglycerate mutase -
  VKP36_RS05700 (VKP36_05700) - 1136423..1137358 (+) 936 WP_032465092.1 dihydroorotate oxidase -
  VKP36_RS05705 (VKP36_05705) - 1137658..1139520 (-) 1863 WP_136106693.1 heavy metal translocating P-type ATPase -
  VKP36_RS05710 (VKP36_05710) prx 1140052..1140234 (-) 183 WP_014635572.1 hypothetical protein Regulator
  VKP36_RS05715 (VKP36_05715) mf2 1140474..1141232 (+) 759 WP_014635573.1 DNase Mf2 -
  VKP36_RS05720 (VKP36_05720) speC 1141343..1142050 (+) 708 WP_002985327.1 streptococcal pyrogenic exotoxin SpeC -
  VKP36_RS05725 (VKP36_05725) - 1142119..1143336 (-) 1218 WP_014635574.1 peptidoglycan amidohydrolase family protein -
  VKP36_RS05730 (VKP36_05730) - 1143455..1143682 (-) 228 WP_003058873.1 phage holin -
  VKP36_RS05735 (VKP36_05735) - 1143679..1143951 (-) 273 WP_019418840.1 hypothetical protein -
  VKP36_RS05740 (VKP36_05740) - 1143961..1144578 (-) 618 WP_010922094.1 DUF1366 domain-containing protein -
  VKP36_RS05745 (VKP36_05745) - 1144581..1145012 (-) 432 WP_136107654.1 DUF1617 family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 7067.01 Da        Isoelectric Point: 4.1079

>NTDB_id=840802 VKP36_RS05710 WP_014635572.1 1140052..1140234(-) (prx) [Streptococcus pyogenes strain AW-534]
MLTYDEFKQAIDNGYITGDTVMIVRKNGQIFDYVLPNEKIRDWEVVTDEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=840802 VKP36_RS05710 WP_014635572.1 1140052..1140234(-) (prx) [Streptococcus pyogenes strain AW-534]
ATGCTAACATACGACGAATTTAAGCAAGCAATTGACAACGGATATATCACAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTTTTGCCGAATGAGAAGATAAGAGATTGGGAGGTTGTGACAGACGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

90

100

0.9
  prx Streptococcus pyogenes MGAS8232

85

100

0.85
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

73.333

100

0.733
  prx Streptococcus pyogenes MGAS315

90.244

68.333

0.617
  prx Streptococcus pyogenes MGAS315

85.714

70

0.6
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55