Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   VKP54_RS05360 Genome accession   NZ_CP142356
Coordinates   1079021..1079203 (-) Length   60 a.a.
NCBI ID   WP_011184726.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain CT95-157     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1074021..1084203
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP54_RS05345 (VKP54_05345) - 1074469..1075164 (-) 696 WP_002983928.1 phosphoglycerate mutase -
  VKP54_RS05350 (VKP54_05350) - 1075403..1076338 (+) 936 WP_031488541.1 dihydroorotate oxidase -
  VKP54_RS05355 (VKP54_05355) - 1076638..1078500 (-) 1863 WP_031488540.1 heavy metal translocating P-type ATPase -
  VKP54_RS05360 (VKP54_05360) prx 1079021..1079203 (-) 183 WP_011184726.1 hypothetical protein Regulator
  VKP54_RS05365 (VKP54_05365) mf2 1079443..1080201 (+) 759 WP_011184727.1 DNase Mf2 -
  VKP54_RS05370 (VKP54_05370) speC 1080312..1081019 (+) 708 WP_002985327.1 streptococcal pyrogenic exotoxin SpeC -
  VKP54_RS05375 (VKP54_05375) - 1081088..1081840 (-) 753 WP_023611694.1 CHAP domain-containing protein -
  VKP54_RS05380 (VKP54_05380) - 1081842..1082174 (-) 333 WP_003052353.1 phage holin -
  VKP54_RS05385 (VKP54_05385) - 1082176..1082505 (-) 330 WP_111694880.1 hypothetical protein -
  VKP54_RS05390 (VKP54_05390) - 1082516..1083127 (-) 612 WP_111694881.1 DUF1366 domain-containing protein -
  VKP54_RS05395 (VKP54_05395) - 1083130..1083558 (-) 429 WP_111694882.1 DUF1617 family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6936.91 Da        Isoelectric Point: 4.1954

>NTDB_id=840708 VKP54_RS05360 WP_011184726.1 1079021..1079203(-) (prx) [Streptococcus pyogenes strain CT95-157]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPNEKIKNGEIVTDEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=840708 VKP54_RS05360 WP_011184726.1 1079021..1079203(-) (prx) [Streptococcus pyogenes strain CT95-157]
ATGCTAACATACGACGAATTTAAACAAGCAATTGACAATGGATATATCACAGCAGACACAGTAATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCGAATGAGAAGATAAAGAATGGAGAAATTGTGACAGACGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

98.333

100

0.983
  prx Streptococcus pyogenes MGAS8232

86.667

100

0.867
  prx Streptococcus pyogenes MGAS315

78.333

100

0.783
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS315

83.721

71.667

0.6
  prx Streptococcus pyogenes MGAS315

85.366

68.333

0.583
  prx Streptococcus pyogenes MGAS315

71.429

70

0.5