Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   VKP56_RS05730 Genome accession   NZ_CP142350
Coordinates   1143695..1143877 (-) Length   60 a.a.
NCBI ID   WP_011017964.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain SS1445     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1138695..1148877
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP56_RS05710 (VKP56_05710) - 1139133..1139828 (-) 696 WP_002983928.1 phosphoglycerate mutase -
  VKP56_RS05715 (VKP56_05715) - 1140067..1141002 (+) 936 WP_021299339.1 dihydroorotate oxidase -
  VKP56_RS05720 (VKP56_05720) - 1141057..1141230 (-) 174 WP_002989134.1 hypothetical protein -
  VKP56_RS05725 (VKP56_05725) - 1141302..1143164 (-) 1863 WP_136099212.1 heavy metal translocating P-type ATPase -
  VKP56_RS05730 (VKP56_05730) prx 1143695..1143877 (-) 183 WP_011017964.1 hypothetical protein Regulator
  VKP56_RS05740 (VKP56_05740) - 1144223..1144798 (-) 576 WP_011054727.1 hypothetical protein -
  VKP56_RS05745 (VKP56_05745) spek 1145274..1146053 (-) 780 WP_038432391.1 streptococcal pyrogenic exotoxin SpeK -
  VKP56_RS05750 (VKP56_05750) - 1146357..1147223 (-) 867 WP_011054729.1 DUF334 domain-containing protein -
  VKP56_RS05755 (VKP56_05755) - 1147211..1147735 (-) 525 WP_011017840.1 Panacea domain-containing protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6841.79 Da        Isoelectric Point: 4.5183

>NTDB_id=840136 VKP56_RS05730 WP_011017964.1 1143695..1143877(-) (prx) [Streptococcus pyogenes strain SS1445]
MLTYDEFKQAIDNGYIAGDTVAIVRKDGQIFDYVLPHEKVKNGEVVTKEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=840136 VKP56_RS05730 WP_011017964.1 1143695..1143877(-) (prx) [Streptococcus pyogenes strain SS1445]
ATGCTAACATACGACGAGTTTAAGCAAGCGATTGACAATGGATATATCGCAGGCGATACAGTAGCGATCGTGCGTAAAGA
CGGACAGATTTTTGATTATGTGTTGCCACATGAGAAAGTAAAGAATGGAGAAGTTGTGACTAAGGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

100

100

1
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

73.333

100

0.733
  prx Streptococcus pyogenes MGAS315

90.244

68.333

0.617
  prx Streptococcus pyogenes MGAS315

83.721

71.667

0.6
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55