Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   VKP56_RS04845 Genome accession   NZ_CP142350
Coordinates   973990..974178 (-) Length   62 a.a.
NCBI ID   WP_011054546.1    Uniprot ID   A0A0H2UUN1
Organism   Streptococcus pyogenes strain SS1445     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 968990..979178
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VKP56_RS04820 (VKP56_04820) - 970790..971161 (+) 372 WP_002989617.1 GntR family transcriptional regulator -
  VKP56_RS04825 (VKP56_04825) - 971161..971859 (+) 699 WP_002984437.1 ABC transporter ATP-binding protein -
  VKP56_RS04830 (VKP56_04830) - 971869..972654 (+) 786 WP_002984433.1 hypothetical protein -
  VKP56_RS04835 (VKP56_04835) - 972785..973399 (-) 615 WP_002989607.1 TVP38/TMEM64 family protein -
  VKP56_RS04845 (VKP56_04845) prx 973990..974178 (-) 189 WP_011054546.1 hypothetical protein Regulator
  VKP56_RS04850 (VKP56_04850) spel 974293..975081 (-) 789 WP_020833516.1 streptococcal pyrogenic exotoxin SpeL -
  VKP56_RS04855 (VKP56_04855) spem 975364..976077 (-) 714 WP_014635497.1 streptococcal pyrogenic exotoxin SpeM -
  VKP56_RS04860 (VKP56_04860) - 976461..977021 (-) 561 WP_011018106.1 GNAT family N-acetyltransferase -
  VKP56_RS04865 (VKP56_04865) - 977054..977218 (-) 165 WP_021340366.1 hypothetical protein -
  VKP56_RS04870 (VKP56_04870) - 977367..978572 (-) 1206 WP_326656485.1 glucosaminidase domain-containing protein -
  VKP56_RS04875 (VKP56_04875) - 978688..978915 (-) 228 WP_136059203.1 phage holin -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7226.17 Da        Isoelectric Point: 3.9947

>NTDB_id=840130 VKP56_RS04845 WP_011054546.1 973990..974178(-) (prx) [Streptococcus pyogenes strain SS1445]
MLTYDEFKQAIDDGYIVGDTVMIVRKNGQIFDYVLPHEEARNGEVVTEEKVEEVMVELDYIK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=840130 VKP56_RS04845 WP_011054546.1 973990..974178(-) (prx) [Streptococcus pyogenes strain SS1445]
ATGCTAACATACGACGAATTTAAGCAAGCTATTGATGACGGATATATCGTAGGAGACACAGTTATGATCGTACGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAGGAAGCGAGAAATGGAGAAGTTGTGACAGAGGAGAAGGTGGAAGAAG
TGATGGTGGAATTAGACTATATCAAATGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UUN1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1
  prx Streptococcus pyogenes MGAS315

84.746

95.161

0.806
  prx Streptococcus pyogenes MGAS8232

84.483

93.548

0.79
  prx Streptococcus pyogenes MGAS315

82.759

93.548

0.774
  prx Streptococcus pyogenes MGAS315

77.966

95.161

0.742
  prx Streptococcus pyogenes MGAS315

87.805

66.129

0.581
  prx Streptococcus pyogenes MGAS315

76.19

67.742

0.516