Detailed information    

insolico Bioinformatically predicted

Overview

Name   uvrA   Type   Machinery gene
Locus tag   VJ737_RS18330 Genome accession   NZ_CP141909
Coordinates   4060963..4063248 (-) Length   761 a.a.
NCBI ID   WP_184594733.1    Uniprot ID   A0A7W4ZTG2
Organism   Streptomyces sp. CGMCC 4.1772     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4055963..4068248
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VJ737_RS18305 (VJ737_18305) - 4056012..4056782 (-) 771 WP_184594743.1 MerR family transcriptional regulator -
  VJ737_RS18310 (VJ737_18310) - 4056945..4058231 (+) 1287 WP_184594741.1 ion channel protein -
  VJ737_RS18315 (VJ737_18315) - 4058269..4059675 (+) 1407 WP_184594739.1 glutamate decarboxylase -
  VJ737_RS18320 (VJ737_18320) - 4059672..4060274 (-) 603 WP_184594737.1 PadR family transcriptional regulator -
  VJ737_RS18325 (VJ737_18325) - 4060285..4060836 (-) 552 WP_184594735.1 DinB family protein -
  VJ737_RS18330 (VJ737_18330) uvrA 4060963..4063248 (-) 2286 WP_184594733.1 excinuclease ABC subunit UvrA Machinery gene
  VJ737_RS18335 (VJ737_18335) - 4063301..4063789 (-) 489 WP_184594731.1 glutathione peroxidase -
  VJ737_RS18340 (VJ737_18340) - 4063948..4064778 (-) 831 WP_184594729.1 ABC transporter permease -
  VJ737_RS18345 (VJ737_18345) - 4064775..4065764 (-) 990 WP_184594727.1 ATP-binding cassette domain-containing protein -
  VJ737_RS18350 (VJ737_18350) rfbB 4065840..4066823 (-) 984 WP_184594725.1 dTDP-glucose 4,6-dehydratase -
  VJ737_RS18355 (VJ737_18355) - 4066857..4068137 (-) 1281 WP_184594723.1 activator-dependent family glycosyltransferase -

Sequence

Protein


Download         Length: 761 a.a.        Molecular weight: 82243.90 Da        Isoelectric Point: 5.9654

>NTDB_id=838698 VJ737_RS18330 WP_184594733.1 4060963..4063248(-) (uvrA) [Streptomyces sp. CGMCC 4.1772]
MNQTPVTATDEGIQVVGARENNLKDVSLVIPKNRISVFVGVSGSGKSSLVFDTVAVEAQRQLNATFPWNIRHDLPKFERP
HVDAVTRLTTPVVVDQRPLGGNARSTVGTVTDVYTVMRVLFANHGNDGLGQTWLYSFNDPKGMCPECEGLGRARRPSPEL
MTDPGKSIAEGAILLPGYTVGSANWQFYANYEHLDAEKKLADYTDEEMHTLLHGSSGTVEVTYPNGNVLALRYEGLVDSF
VRRHLKRDTGGMSKAARDKAAEFFTDGVCPTCEGARLNQKALATRIDGHNISDWSQMQVSDLIGVVATLRERLDTPLVTT
IIETLEQIQAIGLGYLTLDRSTTSLSGGEGQRLKLVNHLGSELTGLTYIFDEPSVGLHPRDVSRLNDLLRALRDKGNTVL
VVEHDPDVMAVADHVVEIGPRAGVHGGTIVFEGAYDELRTSDTLTGQGLRRTGGIKENPRPWGRTLPIRDATANNLKNVS
TEIPCGVLTAVTGVAGAGKSSLIAHAFRDQYPGSVFVDQSPIPRSSRSTPASYLKLMDPIRKLFAKASGEDASLFSFNSK
GACEECEGRGLLITEVAYMDPVTTHCEVCEGRRFKESVLQHRVRGKNIADVLAMSAEEAGEFFLSGPLRAKANALIETGI
GYLGLGQSLATLSGGERQRLKLADRLSGSGTVYILDEPTTGLHLSDIDNLVGLLNRIVDRGNTVIVIEHDLAVISQADWV
IDLGPEGGNTGGEIVFTGTPAELAKATHSHTGQHLSLYLEH

Nucleotide


Download         Length: 2286 bp        

>NTDB_id=838698 VJ737_RS18330 WP_184594733.1 4060963..4063248(-) (uvrA) [Streptomyces sp. CGMCC 4.1772]
GTGAACCAGACGCCGGTTACCGCAACCGACGAGGGCATCCAGGTCGTAGGTGCCCGAGAGAACAACCTGAAGGACGTCTC
CCTCGTCATCCCCAAGAACCGGATCTCGGTCTTCGTCGGCGTCTCCGGCTCCGGAAAGTCCTCCCTGGTCTTCGACACCG
TCGCCGTGGAGGCCCAGCGGCAGCTCAACGCCACCTTCCCCTGGAACATCCGGCACGACCTGCCCAAGTTCGAACGGCCG
CACGTCGACGCGGTCACCCGGCTGACCACCCCGGTCGTGGTCGACCAGCGCCCCCTCGGCGGCAACGCCCGCTCCACCGT
CGGCACCGTCACCGACGTCTACACCGTGATGCGCGTGCTCTTCGCCAACCACGGCAACGACGGCCTCGGCCAGACCTGGC
TCTACTCCTTCAACGACCCCAAGGGCATGTGCCCCGAGTGCGAGGGCCTCGGCCGCGCCCGGCGTCCCAGCCCCGAGCTG
ATGACCGACCCCGGCAAGTCCATCGCCGAGGGCGCCATCCTCCTGCCCGGCTACACCGTGGGCAGCGCCAACTGGCAGTT
CTACGCCAACTACGAGCACCTGGACGCCGAGAAGAAGCTCGCGGACTACACCGACGAGGAGATGCACACCCTGCTGCACG
GCAGCAGCGGCACGGTCGAGGTGACCTACCCCAACGGCAACGTGCTGGCGCTGCGCTACGAGGGCCTGGTGGACAGCTTC
GTCCGCCGCCACCTCAAGCGGGACACGGGCGGCATGAGCAAGGCGGCCCGCGACAAGGCGGCCGAGTTCTTCACCGACGG
CGTCTGCCCCACCTGCGAGGGCGCCCGGCTCAACCAGAAGGCGCTCGCCACCCGCATCGACGGCCACAACATCTCCGACT
GGTCCCAGATGCAGGTCAGCGACCTCATCGGCGTGGTCGCCACGCTCCGGGAGCGGCTCGACACCCCGCTCGTCACCACC
ATCATCGAGACGCTGGAGCAGATCCAGGCCATCGGCCTCGGCTACCTCACCCTCGACCGGTCCACCACCTCGCTCTCCGG
GGGCGAGGGCCAGCGGCTCAAGCTCGTCAACCACCTCGGCAGCGAACTGACCGGCCTGACCTACATCTTCGACGAGCCCA
GCGTCGGCCTGCACCCGCGCGACGTCAGCCGGCTCAACGACCTGCTGCGCGCGCTGCGCGACAAGGGCAACACGGTCCTC
GTCGTGGAGCACGACCCCGACGTCATGGCGGTCGCCGACCACGTCGTCGAGATCGGTCCGCGGGCCGGCGTGCACGGCGG
CACGATCGTCTTCGAAGGCGCCTACGACGAACTCCGCACCAGCGACACGCTGACCGGGCAGGGACTGCGGCGCACCGGCG
GGATCAAGGAGAACCCCCGCCCGTGGGGCCGGACCCTGCCGATCCGGGACGCCACGGCCAACAACCTGAAGAACGTCTCC
ACGGAGATCCCGTGCGGTGTCCTCACCGCCGTCACCGGAGTGGCCGGCGCCGGCAAGAGCTCCCTGATCGCCCACGCCTT
CCGGGACCAGTACCCGGGGTCCGTCTTCGTCGACCAGTCGCCCATCCCGCGCTCCTCGCGGTCCACCCCGGCGAGCTACC
TCAAGCTGATGGACCCGATCCGCAAGCTCTTCGCCAAGGCCAGTGGCGAGGACGCCTCACTCTTCAGCTTCAACTCCAAG
GGCGCGTGCGAGGAGTGCGAGGGCCGCGGCCTGCTCATCACCGAGGTCGCCTACATGGACCCGGTCACCACGCACTGCGA
GGTCTGCGAGGGCCGGCGCTTCAAGGAGTCGGTGCTCCAGCACCGGGTGCGCGGCAAGAACATCGCGGACGTCCTGGCGA
TGTCCGCCGAGGAAGCGGGGGAGTTCTTCCTCTCGGGCCCGCTGCGTGCCAAGGCCAACGCCCTGATCGAGACCGGCATC
GGCTACCTCGGTCTCGGCCAGTCGCTGGCCACACTGTCCGGCGGTGAACGGCAGCGGCTCAAGCTCGCCGACCGGCTCTC
CGGCTCGGGCACGGTCTACATCCTCGACGAGCCGACCACCGGCCTGCACCTGTCCGACATCGACAACCTCGTCGGCCTGC
TGAACCGGATCGTCGACCGGGGCAACACCGTCATCGTCATCGAGCACGACCTGGCCGTGATCTCCCAGGCCGACTGGGTC
ATCGACCTCGGGCCCGAGGGCGGCAACACCGGCGGCGAGATCGTCTTCACGGGCACGCCCGCCGAACTGGCGAAGGCGAC
GCATTCGCACACCGGGCAGCACCTGAGCCTGTACCTGGAGCACTAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(476-679)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7W4ZTG2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrA Streptococcus pneumoniae R6

40.087

90.145

0.361
  uvrA Streptococcus pneumoniae TIGR4

40.087

90.145

0.361
  uvrA Streptococcus pneumoniae D39

40.087

90.145

0.361