Detailed information NTG0838513

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: QPL78_RS17485
• Genome accession: NZ_CP126530
• Coordinates: 3400850..3401446 (+)
• Length: 198 a.a.
• NCBI ID: WP_284559783.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain Tehuacan_S4
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3395850..3406446

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QPL78_RS17455 (QPL78_17455)	aspP	3396815..3398377 (+)	1563	WP_268511134.1	aspartate/proton symporter AspP	-
QPL78_RS17460 (QPL78_17460)	-	3398473..3399057 (+)	585	WP_106019606.1	TetR family transcriptional regulator	-
QPL78_RS17465 (QPL78_17465)	-	3399135..3399470 (+)	336	WP_044160350.1	multidrug efflux SMR transporter	-
QPL78_RS17470 (QPL78_17470)	-	3399470..3399784 (+)	315	WP_024122952.1	multidrug efflux SMR transporter	-
QPL78_RS17475 (QPL78_17475)	-	3399829..3400344 (-)	516	WP_024122953.1	DUF3231 family protein	-
QPL78_RS17485 (QPL78_17485)	clpP	3400850..3401446 (+)	597	WP_284559783.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
QPL78_RS17490 (QPL78_17490)	-	3401481..3402056 (-)	576	WP_024122955.1	TIGR00730 family Rossman fold protein	-
QPL78_RS17495 (QPL78_17495)	-	3402173..3402493 (+)	321	WP_101864726.1	MazG-like family protein	-
QPL78_RS17500 (QPL78_17500)	-	3402521..3404131 (-)	1611	WP_227598861.1	SulP family inorganic anion transporter	-
QPL78_RS17505 (QPL78_17505)	-	3404150..3404734 (-)	585	WP_284559784.1	carbonic anhydrase	-
QPL78_RS17510 (QPL78_17510)	-	3405138..3406115 (+)	978	WP_284559785.1	D-glycerate dehydrogenase	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21859.11 Da
• Isoelectric Point: 4.7114

>NTDB_id=838513 QPL78_RS17485 WP_284559783.1 3400850..3401446(+) (clpP) [Bacillus halotolerans strain Tehuacan_S4]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTRNSEEQK

Nucleotide

• Length: 597 bp

>NTDB_id=838513 QPL78_RS17485 WP_284559783.1 3400850..3401446(+) (clpP) [Bacillus halotolerans strain Tehuacan_S4]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTTTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGAAGCGG
AAGACCCTGAAAAAGATATTTCTATTTACATCAACAGCCCGGGCGGCTCTATCACGGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCTTGCTTGCTGCCGG
AGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTCATGATTCACCAGCCTCTTGGCGGAGCTCAAGGTCAAGCGA
CAGAAATTGAAATTGCCGCGAAACGTATTCTCTTGCTTCGCGACAAATTAAACAAAGTGCTTGCTGAACGTACTGGCCAG
CCTCTTGAAGTGATCGAACGCGACACAGACCGCGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTCTGACTCGCAACTCAGAAGAGCAAAAGTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	95.431	99.495	0.949
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.063	96.465	0.657
clpP	Streptococcus thermophilus LMG 18311	59.067	97.475	0.576
clpP	Streptococcus thermophilus LMD-9	59.067	97.475	0.576
clpP	Streptococcus pneumoniae Rx1	58.247	97.98	0.571
clpP	Streptococcus pneumoniae D39	58.247	97.98	0.571
clpP	Streptococcus pneumoniae R6	58.247	97.98	0.571
clpP	Streptococcus pneumoniae TIGR4	58.247	97.98	0.571
clpP	Lactococcus lactis subsp. cremoris KW2	57.732	97.98	0.566
clpP	Streptococcus pyogenes JRS4	56.477	97.475	0.551
clpP	Streptococcus pyogenes MGAS315	56.477	97.475	0.551
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	55.67	97.98	0.545
clpP	Streptococcus mutans UA159	55.155	97.98	0.54