Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   QMM94_RS01545 Genome accession   NZ_AP027134
Coordinates   354523..355368 (+) Length   281 a.a.
NCBI ID   WP_209205863.1    Uniprot ID   -
Organism   Staphylococcus aureus strain JP008     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 349523..360368
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMM94_RS01530 (JP008_03000) - 349791..351632 (-) 1842 WP_000077323.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  QMM94_RS01535 (JP008_03010) metC 351601..352761 (-) 1161 WP_000175842.1 cystathionine beta-lyase MetC -
  QMM94_RS01540 (JP008_03020) - 352758..353861 (-) 1104 WP_000655698.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  QMM94_RS01545 (JP008_03030) spo0J 354523..355368 (+) 846 WP_209205863.1 ParB/RepB/Spo0J family partition protein Regulator
  QMM94_RS01550 (JP008_03040) - 355522..356403 (+) 882 WP_000373075.1 mechanosensitive ion channel family protein -
  QMM94_RS01555 (JP008_03050) - 356433..356636 (+) 204 WP_154283664.1 DUF951 domain-containing protein -
  QMM94_RS01560 (JP008_03060) ychF 356648..357745 (+) 1098 WP_001218728.1 redox-regulated ATPase YchF -
  QMM94_RS01565 (JP008_03070) - 357831..358022 (-) 192 WP_001052483.1 hypothetical protein -
  QMM94_RS01570 (JP008_03080) rpsF 358266..358562 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  QMM94_RS01575 (JP008_03090) ssbA 358583..359086 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  QMM94_RS01580 (JP008_03100) rpsR 359138..359380 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32917.97 Da        Isoelectric Point: 10.0446

>NTDB_id=83748 QMM94_RS01545 WP_209205863.1 354523..355368(+) (spo0J) [Staphylococcus aureus strain JP008]
MSELSKSEDQRITKTKYEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGTKVDISIKKSVGKISFEFDSQEDFLRIIEQLNRRYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=83748 QMM94_RS01545 WP_209205863.1 354523..355368(+) (spo0J) [Staphylococcus aureus strain JP008]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAATATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
AGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTGCCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTCAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGTACCAAAGTAGATATATCGATAAAAAAATCGGTTGGTAAAATCTCATTTGAGTTTGATTCACAAGAAGA
TTTTCTAAGAATAATTGAACAATTAAATCGTAGGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.379

92.883

0.384

Multiple sequence alignment