Detailed information NTG0837193

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: QNM98_RS12855
• Genome accession: NZ_CP126226
• Coordinates: 2610092..2610706 (-)
• Length: 204 a.a.
• NCBI ID: WP_284064731.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain B31
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2605092..2615706

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNM98_RS12825 (QNM98_12825)	rpsT	2605395..2605661 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
QNM98_RS12830 (QNM98_12830)	holA	2605678..2606719 (-)	1042	Protein_2481	DNA polymerase III subunit delta	-
QNM98_RS12835 (QNM98_12835)	-	2606759..2606910 (-)	152	Protein_2482	hypothetical protein	-
QNM98_RS12840 (QNM98_12840)	-	2606951..2607085 (+)	135	WP_003152870.1	YqzM family protein	-
QNM98_RS12845 (QNM98_12845)	comEC	2607104..2609455 (-)	2352	WP_256683591.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
QNM98_RS12850 (QNM98_12850)	-	2609456..2610025 (-)	570	WP_003152868.1	ComE operon protein 2	-
QNM98_RS12855 (QNM98_12855)	comEA	2610092..2610706 (-)	615	WP_284064731.1	helix-hairpin-helix domain-containing protein	Machinery gene
QNM98_RS12860 (QNM98_12860)	comER	2610765..2611586 (+)	822	WP_064107158.1	late competence protein ComER	-
QNM98_RS12865 (QNM98_12865)	-	2611655..2612392 (-)	738	WP_015417856.1	class I SAM-dependent methyltransferase	-
QNM98_RS12870 (QNM98_12870)	rsfS	2612389..2612745 (-)	357	WP_007408260.1	ribosome silencing factor	-
QNM98_RS12875 (QNM98_12875)	yqeK	2612763..2613323 (-)	561	WP_007408259.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
QNM98_RS12880 (QNM98_12880)	-	2613313..2613882 (-)	570	WP_007408258.1	nicotinate-nucleotide adenylyltransferase	-
QNM98_RS12885 (QNM98_12885)	yhbY	2613893..2614183 (-)	291	WP_007408257.1	ribosome assembly RNA-binding protein YhbY	-
QNM98_RS12890 (QNM98_12890)	aroE	2614177..2615019 (-)	843	WP_033574150.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22235.45 Da
• Isoelectric Point: 6.4888

>NTDB_id=837193 QNM98_RS12855 WP_284064731.1 2610092..2610706(-) (comEA) [Bacillus velezensis strain B31]
MTKAMMTERLRRNLKILVACLAAGAVFICIWLFRSEKEEPVKQQSVLGQTASVSVADKKDTAADKIMIDVKGAVRNPGVY
EMKAGDRVTQAIEKAGGLKKKADELNVNLAEQLQDGTIVYIPSEGEEENRPKTAAGEKENAAVNINTASLDELQAISGVG
QKKAEAIIAYREENGRFQTAEDLMNVSGFGEKSFERIKTSITVK

Nucleotide

• Length: 615 bp

>NTDB_id=837193 QNM98_RS12855 WP_284064731.1 2610092..2610706(-) (comEA) [Bacillus velezensis strain B31]
ATGACGAAAGCGATGATGACGGAGCGGCTGCGGCGGAACCTGAAAATCCTGGTCGCTTGTCTTGCGGCAGGGGCGGTTTT
TATCTGCATTTGGCTGTTTCGTTCTGAAAAGGAAGAGCCGGTCAAACAGCAGTCCGTGCTTGGCCAAACAGCCTCAGTAT
CCGTCGCGGACAAAAAAGACACCGCAGCCGATAAGATTATGATTGATGTGAAAGGCGCGGTCCGAAATCCCGGCGTGTAT
GAAATGAAAGCGGGAGACAGGGTGACGCAAGCCATTGAAAAAGCCGGCGGCCTGAAGAAAAAGGCGGATGAATTGAATGT
TAATTTAGCAGAGCAGCTGCAGGACGGGACGATTGTTTATATTCCGAGTGAAGGCGAAGAGGAGAATCGCCCGAAAACAG
CAGCGGGTGAAAAGGAGAATGCAGCTGTCAATATCAATACGGCATCTCTGGACGAACTTCAGGCGATTTCCGGGGTGGGG
CAGAAAAAAGCGGAAGCGATTATCGCCTACCGAGAAGAAAACGGACGGTTTCAGACTGCTGAAGATTTGATGAATGTATC
AGGCTTTGGAGAAAAGTCATTTGAGCGGATAAAAACTTCCATTACGGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (141-202)

• SLBB domain (SLBB) (68-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	57.653	96.078	0.554
comEA	Latilactobacillus sakei subsp. sakei 23K	33.19	100	0.377
comEA	Lactococcus lactis subsp. cremoris KW2	34.685	100	0.377
comEA/celA/cilE	Streptococcus pneumoniae Rx1	36.493	100	0.377
comEA/celA/cilE	Streptococcus mitis NCTC 12261	36.493	100	0.377
comEA/celA/cilE	Streptococcus pneumoniae R6	36.493	100	0.377
comEA/celA/cilE	Streptococcus pneumoniae D39	36.493	100	0.377
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	36.493	100	0.377
comEA/celA/cilE	Streptococcus mitis SK321	35.071	100	0.363