Detailed information NTG0835147

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: QNH25_RS16275
• Genome accession: NZ_CP126087
• Coordinates: 3167242..3167838 (+)
• Length: 198 a.a.
• NCBI ID: WP_007500118.1
• Uniprot ID: -
• Organism: Bacillus safensis strain CEW-AP100
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3162242..3172838

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH25_RS16250 (QNH25_16250)	opp1B	3162440..3163369 (-)	930	WP_073207513.1	nickel/cobalt ABC transporter permease	-
QNH25_RS16255 (QNH25_16255)	nikA	3163385..3165025 (-)	1641	WP_197172955.1	nickel ABC transporter substrate-binding protein	-
QNH25_RS16260 (QNH25_16260)	-	3165146..3166315 (-)	1170	WP_283859660.1	macrolide family glycosyltransferase	-
QNH25_RS16265 (QNH25_16265)	-	3166527..3166709 (+)	183	WP_012011344.1	hypothetical protein	-
QNH25_RS16275 (QNH25_16275)	clpP	3167242..3167838 (+)	597	WP_007500118.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
QNH25_RS16280 (QNH25_16280)	-	3167897..3168475 (-)	579	WP_024423542.1	TIGR00730 family Rossman fold protein	-
QNH25_RS16285 (QNH25_16285)	-	3168613..3168954 (+)	342	WP_024423543.1	MazG-like family protein	-
QNH25_RS16290 (QNH25_16290)	-	3168982..3170604 (-)	1623	WP_024423544.1	SulP family inorganic anion transporter	-
QNH25_RS16295 (QNH25_16295)	-	3170642..3171223 (-)	582	WP_024423545.1	carbonic anhydrase	-
QNH25_RS16300 (QNH25_16300)	-	3171777..3172754 (+)	978	WP_133744534.1	D-glycerate dehydrogenase	-

Sequence

Protein

• Length: 198 a.a.
• Molecular weight: 21846.03 Da
• Isoelectric Point: 4.6905

>NTDB_id=835147 QNH25_RS16275 WP_007500118.1 3167242..3167838(+) (clpP) [Bacillus safensis strain CEW-AP100]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQ
PIEVIERDTDRDNFKTAEEALQYGLIDKVLTRNTEEQK

Nucleotide

• Length: 597 bp

>NTDB_id=835147 QNH25_RS16275 WP_007500118.1 3167242..3167838(+) (clpP) [Bacillus safensis strain CEW-AP100]
ATGAATTTAATACCTACAGTCATTGAGCAAACAAATCGTGGGGAAAGAGCTTACGACATTTATTCTCGTCTTTTAAAAGA
CCGTATTATCATGCTTGGTTCTGCGATCGATGACAATGTTGCCAACTCCATCGTGTCACAGCTGCTTTTCTTAGAAGCTG
AAGATCCAGAAAAAGATATTTCTATCTACATTAACAGCCCTGGCGGTTCAATCACAGCTGGTATGGCCATTTACGATACG
ATGCAATTTATTAAACCAAAGGTATCAACTATTTGTATTGGTATGGCTGCATCTATGGGTGCGTTCCTGCTTGCTGCTGG
TGAAAAAGGTAAGCGTTATGCTCTTCCAAACAGTGAAGTCATGATTCACCAACCACTAGGCGGTGCCCAAGGTCAAGCAA
CAGAAATTGAAATTGCGGCAAAACGAATCCTTTCTTTACGCGATAAACTGAACCAAGTACTTGCTGAACGTACTGGTCAG
CCAATTGAAGTCATTGAGCGCGATACAGATCGTGACAACTTCAAAACAGCGGAAGAAGCACTTCAATACGGACTCATTGA
CAAAGTCTTGACCCGTAATACAGAAGAACAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	93.434	100	0.934
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.539	96.465	0.652
clpP	Streptococcus thermophilus LMG 18311	58.549	97.475	0.571
clpP	Streptococcus thermophilus LMD-9	58.549	97.475	0.571
clpP	Lactococcus lactis subsp. cremoris KW2	56.186	97.98	0.551
clpP	Streptococcus pneumoniae Rx1	55.67	97.98	0.545
clpP	Streptococcus pneumoniae D39	55.67	97.98	0.545
clpP	Streptococcus pneumoniae R6	55.67	97.98	0.545
clpP	Streptococcus pneumoniae TIGR4	55.67	97.98	0.545
clpP	Streptococcus pyogenes JRS4	55.44	97.475	0.54
clpP	Streptococcus pyogenes MGAS315	55.44	97.475	0.54
clpP	Streptococcus mutans UA159	54.639	97.98	0.535
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	54.124	97.98	0.53