Detailed information NTG0835087

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: QNH40_RS16960
• Genome accession: NZ_CP126086
• Coordinates: 3252625..3253311 (-)
• Length: 228 a.a.
• NCBI ID: WP_026050153.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain CES-OCA-19
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3247625..3258311

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH40_RS16925 (QNH40_16925)	fliW	3247761..3248195 (-)	435	WP_025208061.1	flagellar assembly protein FliW	-
QNH40_RS16930 (QNH40_16930)	-	3248224..3248802 (-)	579	WP_008348255.1	DUF6470 family protein	-
QNH40_RS16935 (QNH40_16935)	flgL	3248849..3249760 (-)	912	WP_108611024.1	flagellar hook-associated protein FlgL	-
QNH40_RS16940 (QNH40_16940)	flgK	3249769..3251289 (-)	1521	WP_008348259.1	flagellar hook-associated protein FlgK	-
QNH40_RS16945 (QNH40_16945)	-	3251305..3251787 (-)	483	WP_008348261.1	flagellar protein FlgN	-
QNH40_RS16950 (QNH40_16950)	flgM	3251806..3252069 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
QNH40_RS16955 (QNH40_16955)	-	3252149..3252568 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
QNH40_RS16960 (QNH40_16960)	comFC	3252625..3253311 (-)	687	WP_026050153.1	amidophosphoribosyltransferase	Machinery gene
QNH40_RS16965 (QNH40_16965)	-	3253308..3253601 (-)	294	WP_008348267.1	competence protein ComFB	-
QNH40_RS16970 (QNH40_16970)	comFA	3253666..3254793 (-)	1128	WP_008348271.1	DEAD/DEAH box helicase	Machinery gene
QNH40_RS16975 (QNH40_16975)	-	3255165..3256007 (-)	843	WP_007499966.1	DegV family protein	-
QNH40_RS16980 (QNH40_16980)	degU	3256219..3256908 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
QNH40_RS16985 (QNH40_16985)	degS	3256973..3258148 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26195.68 Da
• Isoelectric Point: 10.2584

>NTDB_id=835087 QNH40_RS16960 WP_026050153.1 3252625..3253311(-) (comFC) [Bacillus altitudinis strain CES-OCA-19]
MICPICESHFVADFTWKSFLLLNEDRLCVACKNHLMKIQGPTCPKCGRAQSNDQLCQDCSRWNKRRDFAEILVMNRSVYA
YNNFMKDILARFKFRGDTALADLFKKDVQSAFKRSFSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVH
QRKQSKKRKNERLHQQNLFQLRQANPIVPNDIILIDDIYTTGATVYHAAKILKEAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=835087 QNH40_RS16960 WP_026050153.1 3252625..3253311(-) (comFC) [Bacillus altitudinis strain CES-OCA-19]
TTGATTTGTCCAATTTGTGAGAGCCATTTTGTGGCTGATTTTACATGGAAATCATTCCTACTATTAAATGAAGATCGTTT
ATGTGTAGCATGTAAGAACCACCTGATGAAGATTCAAGGTCCTACTTGTCCCAAATGCGGAAGAGCGCAATCAAATGATC
AATTGTGTCAAGATTGTTCAAGGTGGAATAAACGACGGGATTTTGCTGAGATTCTTGTAATGAATCGGTCTGTTTATGCT
TACAACAACTTTATGAAAGATATTCTAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGA
TGTACAGTCAGCGTTTAAACGTTCTTTTTCAATCAAAGAACCGGTGCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAA
AGGAAAGAGGATTCAATCAGTCAATGATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTACAT
CAAAGGAAGCAGTCTAAGAAAAGAAAAAATGAACGTTTACATCAACAGAATTTGTTCCAATTAAGGCAGGCAAACCCGAT
CGTTCCAAACGATATCATATTAATCGATGATATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAG
AAGCAGGCGCCAAAAGTGTTTCCTCTTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (3-59)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	50	100	0.504
comFC/cflB	Streptococcus mitis SK321	39.301	100	0.395
comFC/cflB	Streptococcus mitis NCTC 12261	38.428	100	0.386
comFC/cflB	Streptococcus pneumoniae TIGR4	37.555	100	0.377
comFC/cflB	Streptococcus pneumoniae Rx1	37.555	100	0.377
comFC/cflB	Streptococcus pneumoniae D39	37.555	100	0.377
comFC/cflB	Streptococcus pneumoniae R6	37.555	100	0.377