Detailed information NTG0835090

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QNH40_RS16985
• Genome accession: NZ_CP126086
• Coordinates: 3256973..3258148 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain CES-OCA-19
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3251973..3263148

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH40_RS16955 (QNH40_16955)	-	3252149..3252568 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
QNH40_RS16960 (QNH40_16960)	comFC	3252625..3253311 (-)	687	WP_026050153.1	amidophosphoribosyltransferase	Machinery gene
QNH40_RS16965 (QNH40_16965)	-	3253308..3253601 (-)	294	WP_008348267.1	competence protein ComFB	-
QNH40_RS16970 (QNH40_16970)	comFA	3253666..3254793 (-)	1128	WP_008348271.1	DEAD/DEAH box helicase	Machinery gene
QNH40_RS16975 (QNH40_16975)	-	3255165..3256007 (-)	843	WP_007499966.1	DegV family protein	-
QNH40_RS16980 (QNH40_16980)	degU	3256219..3256908 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
QNH40_RS16985 (QNH40_16985)	degS	3256973..3258148 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
QNH40_RS16990 (QNH40_16990)	-	3258370..3259038 (+)	669	WP_282900190.1	YigZ family protein	-
QNH40_RS16995 (QNH40_16995)	-	3259023..3260120 (+)	1098	WP_007499958.1	LCP family protein	-
QNH40_RS17000 (QNH40_17000)	-	3260158..3261225 (-)	1068	WP_007499956.1	MraY family glycosyltransferase	-
QNH40_RS17005 (QNH40_17005)	-	3261360..3262607 (-)	1248	WP_017368143.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=835090 QNH40_RS16985 WP_003213166.1 3256973..3258148(-) (degS) [Bacillus altitudinis strain CES-OCA-19]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=835090 QNH40_RS16985 WP_003213166.1 3256973..3258148(-) (degS) [Bacillus altitudinis strain CES-OCA-19]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTCAGGGAAAGAAGAGACGATCTCGAAAGACGATTGTTAAGCTTACAAGACGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATAGAACGGATTTTTAGAGACCGTG
GAACAGAAGAAGGATTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCTTAGGTGATACTGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841