Detailed information NTG0833432

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: QM342_RS07355
• Genome accession: NZ_CP125895
• Coordinates: 1546708..1547019 (-)
• Length: 103 a.a.
• NCBI ID: WP_215347180.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain CHAL5
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1541708..1552019

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QM342_RS07320 (QM342_07320)	gcvPA	1542210..1543556 (-)	1347	WP_000019692.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
QM342_RS07325 (QM342_07325)	gcvT	1543576..1544667 (-)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
QM342_RS07330 (QM342_07330)	-	1544826..1545350 (-)	525	WP_001015120.1	shikimate kinase	-
QM342_RS07335 (QM342_07335)	-	1545340..1545486 (-)	147	WP_001792109.1	hypothetical protein	-
QM342_RS07340 (QM342_07340)	comGF	1545583..1546080 (-)	498	WP_001788897.1	competence type IV pilus minor pilin ComGF	Machinery gene
QM342_RS07345 (QM342_07345)	comGE	1545998..1546297 (-)	300	WP_000844410.1	hypothetical protein	Machinery gene
QM342_RS07350 (QM342_07350)	comGD	1546284..1546730 (-)	447	WP_001788899.1	competence type IV pilus minor pilin ComGD	Machinery gene
QM342_RS07355 (QM342_07355)	comGC	1546708..1547019 (-)	312	WP_215347180.1	competence type IV pilus major pilin ComGC	Machinery gene
QM342_RS07360 (QM342_07360)	comGB	1547033..1548103 (-)	1071	WP_000776422.1	competence type IV pilus assembly protein ComGB	Machinery gene
QM342_RS07365 (QM342_07365)	comGA	1548075..1549049 (-)	975	WP_000697217.1	competence type IV pilus ATPase ComGA	Machinery gene
QM342_RS07370 (QM342_07370)	-	1549101..1549724 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
QM342_RS07375 (QM342_07375)	-	1549721..1550050 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
QM342_RS07380 (QM342_07380)	-	1550050..1551036 (-)	987	WP_000161314.1	ROK family glucokinase	-
QM342_RS07385 (QM342_07385)	-	1551033..1551236 (-)	204	WP_000087561.1	YqgQ family protein	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11257.32 Da
• Isoelectric Point: 9.2164

>NTDB_id=833432 QM342_RS07355 WP_215347180.1 1546708..1547019(-) (comGC) [Staphylococcus aureus strain CHAL5]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEGLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=833432 QM342_RS07355 WP_215347180.1 1546708..1547019(-) (comGC) [Staphylococcus aureus strain CHAL5]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGGCTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus N315	99.029	100	0.99
comGC	Staphylococcus aureus MW2	99.029	100	0.99
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	48.718	75.728	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369