Detailed information NTG0832302

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: QMA40_RS13880
• Genome accession: NZ_CP125661
• Coordinates: 2686512..2687093 (-)
• Length: 193 a.a.
• NCBI ID: WP_000991610.1
• Uniprot ID: A0A9W5QF48
• Organism: Bacillus thuringiensis strain BV5
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2681512..2692093

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMA40_RS13850 (QMA40_13790)	-	2682136..2682615 (-)	480	WP_000106226.1	HIT family protein	-
QMA40_RS13855 (QMA40_13795)	-	2682727..2682894 (-)	168	WP_410491117.1	septum formation initiator	-
QMA40_RS13860 (QMA40_13800)	-	2683112..2683348 (+)	237	WP_000283222.1	hypothetical protein	-
QMA40_RS13865 (QMA40_13805)	-	2683402..2684238 (-)	837	WP_001084760.1	ABC transporter permease	-
QMA40_RS13870 (QMA40_13810)	-	2684231..2685436 (-)	1206	WP_098292942.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
QMA40_RS13875 (QMA40_13815)	-	2685608..2686465 (+)	858	WP_098292941.1	glycine betaine ABC transporter substrate-binding protein	-
QMA40_RS13880 (QMA40_13820)	clpP	2686512..2687093 (-)	582	WP_000991610.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
QMA40_RS13885 (QMA40_13825)	-	2687115..2687801 (-)	687	WP_030025885.1	RNA polymerase subunit sigma-70	-
QMA40_RS13890 (QMA40_13830)	-	2687944..2688264 (+)	321	WP_030025887.1	2Fe-2S iron-sulfur cluster-binding protein	-
QMA40_RS13895 (QMA40_13835)	rpiA	2688269..2688931 (+)	663	WP_098292940.1	ribose 5-phosphate isomerase A	-
QMA40_RS13900 (QMA40_13840)	-	2689046..2689480 (+)	435	WP_001190864.1	GNAT family N-acetyltransferase	-
QMA40_RS13905 (QMA40_13845)	-	2689607..2690974 (-)	1368	WP_065845369.1	lytic polysaccharide monooxygenase	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21192.45 Da
• Isoelectric Point: 5.0776

>NTDB_id=832302 QMA40_RS13880 WP_000991610.1 2686512..2687093(-) (clpP) [Bacillus thuringiensis strain BV5]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDDVVTKK

Nucleotide

• Length: 582 bp

>NTDB_id=832302 QMA40_RS13880 WP_000991610.1 2686512..2687093(-) (clpP) [Bacillus thuringiensis strain BV5]
ATGAATGCAATTCCATATGTAGTAGAACAAACAAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTGAAAGA
CCGCATTATTATTATCGGCTCAGAAATTAATGATCAAGTAGCGAGTAGTGTCGTAGCGCAATTATTATTTTTAGAAGCAG
AAGATGCAGAAAAAGATATATTCTTATACATCAATAGCCCTGGCGGTTCAACGACAGCAGGTTTTGCAATATTAGATACG
ATGAATTTAATTAAACCAGATGTGCAAACGCTATGCATGGGCTTTGCGGCATCATTCGGTGCATTGTTATTATTATCAGG
AGCAAAAGGAAAACGGTTTGCGCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAAAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACGGGGCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACTGCAGAAGAAGCGAAGGCATATGGGATTGTAGA
TGACGTTGTTACGAAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	68.586	98.964	0.679
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.196	97.927	0.658
clpP	Streptococcus pyogenes JRS4	56.085	97.927	0.549
clpP	Streptococcus pyogenes MGAS315	56.085	97.927	0.549
clpP	Streptococcus pneumoniae R6	55.208	99.482	0.549
clpP	Streptococcus pneumoniae TIGR4	55.208	99.482	0.549
clpP	Streptococcus pneumoniae Rx1	55.208	99.482	0.549
clpP	Streptococcus thermophilus LMG 18311	55.208	99.482	0.549
clpP	Streptococcus thermophilus LMD-9	55.208	99.482	0.549
clpP	Streptococcus pneumoniae D39	55.208	99.482	0.549
clpP	Streptococcus mutans UA159	53.968	97.927	0.528
clpP	Lactococcus lactis subsp. cremoris KW2	52.381	97.927	0.513
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	50.265	97.927	0.492